| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638290
Identifier: 121638290
GI number: 121638290
Start: 2671683
End: 2672522
Strand: Reverse
Name: 121638290
Synonym: BCG_2425c
Alternate gene names: NA
Gene position: 2672522-2671683 (Counterclockwise)
Preceding gene: 121638291
Following gene: 121638287
Centisome position: 61.09
GC content: 63.69
Gene sequence:
>840_bases ATGTGGCGAACCCGGGTGGTGCACACCACCGGATATGTCTACCAGTCGCCGGTGACGGCCTCATACAACGAAGCCCGGCT GACCCCTCGGTCGAGTTCGCGGCAGAACCTCGTCCTCAACCGAGTCGAAACCATCCCGGCCACCCGCTCCTACCGCTATA TCGATTATTGGGGTACTGCCGTGACGGCGTTTGACTTGCATGCGCCGCACACCGAACTGACGGTGACGTCCTCGTCGGTG GTGGAGACCGAGCGCCCGGAGCCGTTGGCCGCCAAGGCAACCTGGGCCGACCTGCAATCGACGGCCGTGATCGACAGGTT CGACGAAGTGCTCCGCCCAACCCCGCACACCCCGGCAAGCGCCCGCGTTGATGCCGTCGGCAGGCGGATCAGGAAATGCC ATGAGCCCAGCGAGGCCGTAGTCGCCGCCGCCCGGTGGGCGCGCAGCGAGCTGGACTACATTCCGGGCACCACCAGTGTG CACTCGTCCGGGCTCGATGCGCTGGAACAAGGCAAGGGCGTCTGCCAGGACTTCGTGCACTTGTCGCTGATGGTGTTGCG CAGCATGGGAATTCCCTGTCGGTACGTGTCTGGGTATCTACACCCTAAGCGTGATGCCGTGGTGGGAAAGACGGTAGACG GGCGCAGCCATGCCTGGGTTCAGGCCTGGACCGGTGGATGGTGGCACTACGACCCCACCAATGACAATGAGATCACCGAG CAATACATCAGTGTGGGTGTAGGCCGCGACTACACCGACGTTTCCCCGCTGAAAGGGATCTACTCTGGGGAGGGCGTCAC CGACCTCGACGTGGTGGTGGAGATCACCCGGCTGGCTTAG
Upstream 100 bases:
>100_bases GAGATGCATTGGCGCTGCAGTACTTTCACGCAGCTCCCTGGGTTGCGTGGTCGGATGCAGGCCAGCGTGGCCAACTCGTC GGAAGCCAAGAGGAATCCTG
Downstream 100 bases:
>100_bases CGCAGATTCGCGGCGGAGTTTCAGCCCGCCGATAGGCGCCACGGTTGCCTGGGCGGCCGAACGGCTTCCTGCCCGCGCCG TCGTCGCCGCCGCCACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MWRTRVVHTTGYVYQSPVTASYNEARLTPRSSSRQNLVLNRVETIPATRSYRYIDYWGTAVTAFDLHAPHTELTVTSSSV VETERPEPLAAKATWADLQSTAVIDRFDEVLRPTPHTPASARVDAVGRRIRKCHEPSEAVVAAARWARSELDYIPGTTSV HSSGLDALEQGKGVCQDFVHLSLMVLRSMGIPCRYVSGYLHPKRDAVVGKTVDGRSHAWVQAWTGGWWHYDPTNDNEITE QYISVGVGRDYTDVSPLKGIYSGEGVTDLDVVVEITRLA
Sequences:
>Translated_279_residues MWRTRVVHTTGYVYQSPVTASYNEARLTPRSSSRQNLVLNRVETIPATRSYRYIDYWGTAVTAFDLHAPHTELTVTSSSV VETERPEPLAAKATWADLQSTAVIDRFDEVLRPTPHTPASARVDAVGRRIRKCHEPSEAVVAAARWARSELDYIPGTTSV HSSGLDALEQGKGVCQDFVHLSLMVLRSMGIPCRYVSGYLHPKRDAVVGKTVDGRSHAWVQAWTGGWWHYDPTNDNEITE QYISVGVGRDYTDVSPLKGIYSGEGVTDLDVVVEITRLA >Mature_279_residues MWRTRVVHTTGYVYQSPVTASYNEARLTPRSSSRQNLVLNRVETIPATRSYRYIDYWGTAVTAFDLHAPHTELTVTSSSV VETERPEPLAAKATWADLQSTAVIDRFDEVLRPTPHTPASARVDAVGRRIRKCHEPSEAVVAAARWARSELDYIPGTTSV HSSGLDALEQGKGVCQDFVHLSLMVLRSMGIPCRYVSGYLHPKRDAVVGKTVDGRSHAWVQAWTGGWWHYDPTNDNEITE QYISVGVGRDYTDVSPLKGIYSGEGVTDLDVVVEITRLA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 31029; Mature: 31029
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRTRVVHTTGYVYQSPVTASYNEARLTPRSSSRQNLVLNRVETIPATRSYRYIDYWGTA CCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCE VTAFDLHAPHTELTVTSSSVVETERPEPLAAKATWADLQSTAVIDRFDEVLRPTPHTPAS EEEEECCCCCCEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ARVDAVGRRIRKCHEPSEAVVAAARWARSELDYIPGTTSVHSSGLDALEQGKGVCQDFVH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHH LSLMVLRSMGIPCRYVSGYLHPKRDAVVGKTVDGRSHAWVQAWTGGWWHYDPTNDNEITE HHHHHHHHCCCCHHHHHCCCCCCCCCEECCCCCCCCCEEEEEECCCEEECCCCCCHHHHH QYISVGVGRDYTDVSPLKGIYSGEGVTDLDVVVEITRLA HHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHEEHHCC >Mature Secondary Structure MWRTRVVHTTGYVYQSPVTASYNEARLTPRSSSRQNLVLNRVETIPATRSYRYIDYWGTA CCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCE VTAFDLHAPHTELTVTSSSVVETERPEPLAAKATWADLQSTAVIDRFDEVLRPTPHTPAS EEEEECCCCCCEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH ARVDAVGRRIRKCHEPSEAVVAAARWARSELDYIPGTTSVHSSGLDALEQGKGVCQDFVH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHH LSLMVLRSMGIPCRYVSGYLHPKRDAVVGKTVDGRSHAWVQAWTGGWWHYDPTNDNEITE HHHHHHHHCCCCHHHHHCCCCCCCCCEECCCCCCCCCEEEEEECCCEEECCCCCCHHHHH QYISVGVGRDYTDVSPLKGIYSGEGVTDLDVVVEITRLA HHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]