| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638233
Identifier: 121638233
GI number: 121638233
Start: 2600918
End: 2602900
Strand: Direct
Name: 121638233
Synonym: BCG_2368
Alternate gene names: NA
Gene position: 2600918-2602900 (Clockwise)
Preceding gene: 121638230
Following gene: 121638237
Centisome position: 59.46
GC content: 67.83
Gene sequence:
>1983_bases ATGCGTCTCGTTCGCCTGCTCGGCATGGTCCTGACTATCCTCGCCGCCGGGCTGCTGCTGGGGCCGCCCGCTGGCGCGCA ACCACCTTTCCGGCTGTCGAACTACGTGACCGACAACGCGGGCGTGCTGACTAGCTCCGGTCGCACCGCGGTGACGGCGG CCGTCGACCGGCTCTATGCCGATCGCCGCATCCGACTGTGGGTGGTCTACGTCGAGAACTTCTCCGGTCAGAGTGCGCTC AACTGGGCGCAGCGCACGACGCGGACTAGCGAGCTGGGTAACTATGACGCGCTTCTGGCCGTGGCCACCACCGGTCGCGA ATATGCCTTTCTAGTGCCATCCGCGATGCCGGGTGTCAGCGAGGGGCAGGTCGACAACGTGCGGCGCTATCAGATCGAAC CGGCGCTGCACGACGGCGACTACAGCGGCGCGGCCGTTGCGGCGGCGAACGGACTCAACCGGTCACCCAGTTCGTCGAGT CGAGTGGTGTTGTTGGTCACGGTCGGCATCATCGTCATCGTCGTCGCGGTCCTGCTGGTGGTGATGCGCCACCGCAACCG GCGGCGCCGCGCCGACGAGCTGGCCGCGGCACGCCGCGTCGACCCTACCAACGTAATGGCACTGGCCGCCGTGCCGCTTC AGGCCCTCGATGACCTCTCCCGGTCGATGGTGGTAGACGTCGACAACGCCGTGCGCACCAGCACCAACGAGCTCGCGCTG GCCATCGAGGAGTTCGGCGAACGGCGAACCGCACCGTTTACCCAAGCGGTGAACAACGCCAAAGCGGCTCTGTCCCAGGC GTTCACCGTACGCCAACAACTTGATGACAACACGCCCGAGACGCCGGCGCAGCGACGTGAGCTACTCACCCGAGTGATCG TGTCGGCGGCGCACGCCGACCGTGAACTCGCGTCGCAAACCGAGGCCTTCGAGAAGCTACGCGATTTGGTGATCAACGCC CCGGCCCGGCTTGATCTGCTCACCCAGCAGTACGTCGAACTGACCACCCGGATCGGCCCGACTCAGCAACGCCTGGCCGA GCTGCATACCGAATTCGACGCTGCGGCGATGACGTCGATCGCCGGCAATGTCACCACCGCCACCGAGCGGCTGGCGTTCG CCGACCGTAACATCAGCGCGGCTCGGGATCTGGCCGACCAGGCAGTGAGCGGACGGCAAGCCGGACTGGTGGATGCGGTG CGTGCCGCCGAGTCGGCACTCGGGCAAGCCCGGGCGCTGCTCGACGCGGTGGACAGCGCCGCCACCGACATCCGGCACGC CGTCGCGTCGCTGCCGGCGGTCGTGGCCGACATCCAGACGGGCATCAAGCGAGCCAACCAACACCTACAGCAGGCGCAAC AACCCCAAACCGGGCGCACCGGTGACCTGATCGCAGCCCGCGATGCGGCGGCCAGGGCCCTCGATCGCGCGCGCGGAGCC GCCGATCCGTTGACCGCATTTGACCAGTTGACCAAGGTCGACGCTGACCTCGACCGGCTGCTCGCCACCCTGGCCGAAGA ACAGGCAACCGCCGATCGGCTCAACCGCTCACTTGAGCAGGCGCTGTTTACCGCGGAGTCGCGGGTGCGCGCCGTCTCGG AGTACATCGACACCCGCCGCGGCAGCATCGGGCCGGAGGCCCGGACCCGGCTGGCCGAGGCGAAACGGCAGCTGGAAGCC GCACATGACCGGAAATCGAGCAACCCGACCGAAGCGATCGCCTACGCTAACGCGGCATCGACGCTGGCCGCACATGCGCA GTCGCTGGCCAATGCCGACGTGCAATCCGCCCAGCGCGCATACACCCGTCGTGGGGGCAACAACGCCGGCGCGATCCTCG GTGGCATCATCATCGGCGACCTGCTTAGCGGAGGCACCAGAGGCGGGTTGGGTGGATGGATCCCCACGTCGTTCGGCGGT TCGTCGAACGCGCCGGGAAGTTCACCCGACGGCGGGTTCTTGGGCGGCGGCGGGCGGTTCTAA
Upstream 100 bases:
>100_bases TCGTCGTAGGGGTCGTGCTCACTCGCGCTCACCGACCCACAGTCTGCCAGGGTGGTCGCCGCACGCCCGTATCCGCCGGC ACAGCGTCTAAATTGACGGT
Downstream 100 bases:
>100_bases GCCACGCGCCAGCGCACGGGGATACCCGTACGCTGGCGCGTGTGGCCGTCGACCTAGGCTTCTTCCTAGGGTTCGTCGAC CCTGTCAGGCCCAGCTGGAG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSAL NWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSS RVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINA PARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAV RAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEA AHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGG SSNAPGSSPDGGFLGGGGRF
Sequences:
>Translated_660_residues MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSAL NWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSS RVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINA PARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAV RAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEA AHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGG SSNAPGSSPDGGFLGGGGRF >Mature_660_residues MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYADRRIRLWVVYVENFSGQSAL NWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVSEGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSS RVVLLVTVGIIVIVVAVLLVVMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHADRELASQTEAFEKLRDLVINA PARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSIAGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAV RAAESALGQARALLDAVDSAATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRRGSIGPEARTRLAEAKRQLEA AHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRAYTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGG SSNAPGSSPDGGFLGGGGRF
Specific function: May play a role in septum formation
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2345_MYCTU (P95241)
Other databases:
- EMBL: AE000516 - EMBL: BX842579 - PIR: B70662 - RefSeq: NP_216861.1 - RefSeq: NP_336889.1 - ProteinModelPortal: P95241 - EnsemblBacteria: EBMYCT00000003339 - EnsemblBacteria: EBMYCT00000072703 - GeneID: 888960 - GeneID: 923999 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2410 - KEGG: mtu:Rv2345 - TIGR: MT2410 - TubercuList: Rv2345 - GeneTree: EBGT00050000015097 - HOGENOM: HBG566640 - OMA: DDAIPET - ProtClustDB: CLSK872053 - InterPro: IPR007621
Pfam domain/function: PF04536 DUF477
EC number: NA
Molecular weight: Translated: 70030; Mature: 70030
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x17476fa4)-; HASH(0x170a5780)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHH DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCC EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV CCCCCCCHHEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCHHHHH AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCC ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MRLVRLLGMVLTILAAGLLLGPPAGAQPPFRLSNYVTDNAGVLTSSGRTAVTAAVDRLYA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHH DRRIRLWVVYVENFSGQSALNWAQRTTRTSELGNYDALLAVATTGREYAFLVPSAMPGVS CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCC EGQVDNVRRYQIEPALHDGDYSGAAVAAANGLNRSPSSSSRVVLLVTVGIIVIVVAVLLV CCCCCCCHHEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH VMRHRNRRRRADELAAARRVDPTNVMALAAVPLQALDDLSRSMVVDVDNAVRTSTNELAL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCHHHHH AIEEFGERRTAPFTQAVNNAKAALSQAFTVRQQLDDNTPETPAQRRELLTRVIVSAAHAD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RELASQTEAFEKLRDLVINAPARLDLLTQQYVELTTRIGPTQQRLAELHTEFDAAAMTSI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AGNVTTATERLAFADRNISAARDLADQAVSGRQAGLVDAVRAAESALGQARALLDAVDSA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ATDIRHAVASLPAVVADIQTGIKRANQHLQQAQQPQTGRTGDLIAARDAAARALDRARGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCC ADPLTAFDQLTKVDADLDRLLATLAEEQATADRLNRSLEQALFTAESRVRAVSEYIDTRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSIGPEARTRLAEAKRQLEAAHDRKSSNPTEAIAYANAASTLAAHAQSLANADVQSAQRA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTRRGGNNAGAILGGIIIGDLLSGGTRGGLGGWIPTSFGGSSNAPGSSPDGGFLGGGGRF HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036