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The map label for this gene is uspB [H]

Identifier: 121638203

GI number: 121638203

Start: 2566792

End: 2567616

Strand: Direct

Name: uspB [H]

Synonym: BCG_2338

Alternate gene names: 121638203

Gene position: 2566792-2567616 (Clockwise)

Preceding gene: 121638202

Following gene: 121638204

Centisome position: 58.68

GC content: 62.06

Gene sequence:

>825_bases
ATGAGCTCACCTAGTCGCGTCTCCAACACTGCGGTCTACGCGGTGCTGACGATCGGCGCGGTAATCACGCTGTCCCCCTT
CTTGCTTGGCCTGTTGACCTCGTTCACTTCCGCACACCAGTTCGCGACGGGTACTCCGCTGCAGTTGCCGCGACCGCCCA
CGCTGGCCAACTACGCCGATATCGCCGATGCCGGATTTCGCCGCGCGGCGGTGGTGACCGCGTTGATGACGGCGGTGATC
CTGCTGGGCCAGCTGACATTTTCGGTGCTGGCCGCCTACGCGTTCGCGCGGTTGCAATTTCGGGGACGTGATGCGTTGTT
CTGGGTCTACGTCGCAACCTTGATGGTGCCGGGGACGGTGACCGTGGTGCCGCTGTATCTGATGATGGCCCAGCTAGGCC
TGCGCAACACGTTCTGGGCGTTGGTGCTCCCGTTTATGTTCGGTTCGCCGTACGCGATTTTCCTGCTACGCGAGCACTTT
CGCCTCATCCCAGATGACTTGATCAATGCCGCGCGCCTCGACGGTGCCAACACTTTGGACGTGATCGTGCATGTGGTGAT
CCCAAGCAGCCGGCCGGTCCTGGCCGCCTTGGCGATGATCACCGTGGTCTCGCAGTGGAACAACTTCATGTGGCCGTTGG
TGATCACCAGCGGCCACAAATGGCGTGTCCTAACGGTGGCGACGGCTGACCTGCAGTCGCGGTTCAACGACCAGTGGACG
CTGGTGATGGCGGCGACCACGGTGGCAATCGTGCCGCTGATTGCGCTCTTCGTGACCTTCCAGCGGCACATCGTCGCATC
GATTGTGGTCTCGGGGCTCAAGTGA

Upstream 100 bases:

>100_bases
GCGGCAATCGGGCGGGCATCGGTGATGGCGGTGGTGCTGTTCGTCATCCTGGTCGGTGCCACCGTGGTGCAGCATCTGTA
TTTCCGGCGGCGGATCAGCT

Downstream 100 bases:

>100_bases
CCCGGCCCCGCCAGTCCACGCTGGTCGCCACCGCCCTTGTGCTGGTGGCGATCCTGCTGGGTGTGACGGCGGTGCTATTG
GGGCTCTCCGCCGAACCGCG

Product: putative sugar-transport integral membrane protein ABC transporter uspB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSSPSRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYADIADAGFRRAAVVTALMTAVI
LLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHF
RLIPDDLINAARLDGANTLDVIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWT
LVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK

Sequences:

>Translated_274_residues
MSSPSRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYADIADAGFRRAAVVTALMTAVI
LLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHF
RLIPDDLINAARLDGANTLDVIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWT
LVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK
>Mature_273_residues
SSPSRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYADIADAGFRRAAVVTALMTAVIL
LGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFR
LIPDDLINAARLDGANTLDVIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWTL
VMAATTVAIVPLIALFVTFQRHIVASIVVSGLK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=283, Percent_Identity=28.9752650176678, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789860, Length=269, Percent_Identity=29.7397769516729, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29932; Mature: 29801

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYAD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
IADAGFRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH
TVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLD
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
VIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWT
HEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEHHHHHHHCCCCEE
LVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSPSRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
IADAGFRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHH
TVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLD
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH
VIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWT
HEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEHHHHHHHCCCCEE
LVMAATTVAIVPLIALFVTFQRHIVASIVVSGLK
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]