| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638187
Identifier: 121638187
GI number: 121638187
Start: 2554203
End: 2554796
Strand: Direct
Name: 121638187
Synonym: BCG_2322
Alternate gene names: NA
Gene position: 2554203-2554796 (Clockwise)
Preceding gene: 121638186
Following gene: 121638188
Centisome position: 58.39
GC content: 68.01
Gene sequence:
>594_bases ATGACCGACAACGAGTGCCCGGCCGACAGCCGACGGCGCCATGTCCTGCGGCTCGCCCTGTTCGCCGGGATTTTGCTGGG GCTGTTCTACCTGGTTGCGGTGGCACGAGTCATCCACGTCGACGGGGTCCGTAGCGCGGTCGTGGTGGCGACGGGTCCGA TCGCACCCCTGGCGTACGTTGTGGTGTCGGCCGCACTCGGCGCGTTGTTCGTCCCGGGCCCGATCCTCGCCGCCGGCAGC GGGGTGCTGTTCGGGCCGCTACTAGACACCTTTGTGACCCTGCCAGCTTTCTCGGCCGGCGCGCAGGCCGGAATGACGCC CAGGCGCTGCTGGGTGTCGATCGCGCCCATCGCCTCGATGCACAGATCGAACGGCGCGGATTGTGGGCGGTGGTCGGTCA GCGCTTCGTCCCCGGCATCTCGGATGCGCTGGCCTCGTACACCTTCGGGGCGTTCGGAGTTCCGTTGTGGCAGATGGTCG TTGGGTCGTTCATCGGGTCGGCGCCACGGGTGTTCGTCTACACCGCGCTGGGCGCGTCGATCACCAACCTGTCGTCGCCG CTGGTTTACTCGGCGATCGCGGTGTGGTGCGTGA
Upstream 100 bases:
>100_bases GCGCGCCATGTTCCGCGGCGACGGGCGAACCATCGGCGGCGAGGCGCTGGGCCGCTTCGCCGCACTGTATCGCGACACAC TGCTGACCTGAGGGCCCGGC
Downstream 100 bases:
>100_bases CCGCCATCATCGGGGCGTTCGCCGCGCGGCGTTGGTACCGGAAGTGGCGTGCGCGCCCGCGCCGGCGGTGCGGCCTGGCT CAGCTCACGACCGGTAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTDNECPADSRRRHVLRLALFAGILLGLFYLVAVARVIHVDGVRSAVVVATGPIAPLAYVVVSAALGALFVPGPILAAGS GVLFGPLLDTFVTLPAFSAGAQAGMTPRRCWVSIAPIASMHRSNGADCGRWSVSASSPASRMRWPRTPSGRSEFRCGRWS LGRSSGRRHGCSSTPRWARRSPTCRRRWFTRRSRCGA
Sequences:
>Translated_197_residues MTDNECPADSRRRHVLRLALFAGILLGLFYLVAVARVIHVDGVRSAVVVATGPIAPLAYVVVSAALGALFVPGPILAAGS GVLFGPLLDTFVTLPAFSAGAQAGMTPRRCWVSIAPIASMHRSNGADCGRWSVSASSPASRMRWPRTPSGRSEFRCGRWS LGRSSGRRHGCSSTPRWARRSPTCRRRWFTRRSRCGA >Mature_196_residues TDNECPADSRRRHVLRLALFAGILLGLFYLVAVARVIHVDGVRSAVVVATGPIAPLAYVVVSAALGALFVPGPILAAGSG VLFGPLLDTFVTLPAFSAGAQAGMTPRRCWVSIAPIASMHRSNGADCGRWSVSASSPASRMRWPRTPSGRSEFRCGRWSL GRSSGRRHGCSSTPRWARRSPTCRRRWFTRRSRCGA
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TVP38/TMEM64 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 21219; Mature: 21088
Theoretical pI: Translated: 12.31; Mature: 12.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNECPADSRRRHVLRLALFAGILLGLFYLVAVARVIHVDGVRSAVVVATGPIAPLAYV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH VVSAALGALFVPGPILAAGSGVLFGPLLDTFVTLPAFSAGAQAGMTPRRCWVSIAPIASM HHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEHHHHHHH HRSNGADCGRWSVSASSPASRMRWPRTPSGRSEFRCGRWSLGRSSGRRHGCSSTPRWARR HHCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC SPTCRRRWFTRRSRCGA CCHHHHHHHHHHHCCCC >Mature Secondary Structure TDNECPADSRRRHVLRLALFAGILLGLFYLVAVARVIHVDGVRSAVVVATGPIAPLAYV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH VVSAALGALFVPGPILAAGSGVLFGPLLDTFVTLPAFSAGAQAGMTPRRCWVSIAPIASM HHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEHHHHHHH HRSNGADCGRWSVSASSPASRMRWPRTPSGRSEFRCGRWSLGRSSGRRHGCSSTPRWARR HHCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC SPTCRRRWFTRRSRCGA CCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]