| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is nanT [H]
Identifier: 121637808
GI number: 121637808
Start: 2150036
End: 2151304
Strand: Reverse
Name: nanT [H]
Synonym: BCG_1941c
Alternate gene names: 121637808
Gene position: 2151304-2150036 (Counterclockwise)
Preceding gene: 121637811
Following gene: 121637806
Centisome position: 49.18
GC content: 60.84
Gene sequence:
>1269_bases GTGGCAGCACCGCGGTTGACCGGCGACCAGCGAAACGCTTTTATGGCATCTTTCTTGGGTTGGACGATGGATGCGTTCGA TTACTTTCTCGTGGTGCTGGTCTATGCCGACATCGCAACGACCTTCCACCACACCAAGACCGACGTCGCGTTTCTCACCA CCGCCACCCTGGCCATGCGCCCCGTGGGTGCGTTGCTGTTCGGGCTATGGGCCGACCGGGTGGGCCGGCGGGTCCCGCTG ATGGTCGACGTGTCGTTCTATTCGGTGATCGGATTTCTGTGCGCATTCGCACCCAACTTCACCGTGCTGGTGATCCTGCG ACTGCTCTACGGCATTGGCATGGGCGGAGAGTGGGGGCTGGGTGCCGCGCTGTCCATGGAGAAGGTTCCAGCCGAGCGGC GTGGCGTCTTCTCCGGGCTGCTGCAGGAGGGCTACGCGTTCGGCTATCTGCTGGCCAGTGTGGCAGCGCTGGTGGTGATG AACTGGCTAGGGCTGTCGTGGCGGTGGTTGTTCGGCCTAAGCATCATCCCGGCTCTGATCAGCTTGATCATCCGGTACCG GGTAAAGGAATCCGAAGTCTGGGAAGCCGCGCAGGACCGCATGCGGCTCACCAAGACCCGAATCCGCGATGTCCTGGGTA ACCCCGCAATTGTGCGCCGGTTTGTCTACCTAGTGCTGTTGATGACCGCCTTCAACTGGATGAGCCACGGCACCCAGGAT GTCTACCCGACCTTCCTGACCGCGACTACCGATCATGGTGCCGGTTTGTCCAGCCTGACCGCCAGGTGGATAGTGGTGAT CTACAACATCGGCGCCATCATCGGCGGTCTGGCGTTCGGCACGTTGTCCCAGCGGTTCAGCCGCCGTTACACCATCGTTT TCTGTGCGGCGCTGGGACTGCCGATCGTGCCGCTGTTCGCTTACTCGCGCACTGCGGCGATGTTGTGCCTGGGTTCGTTT TTGATGCAAGTCTTCGTACAGGGTGCCTGGGGTGTGATCCCCGCGCATCTGACCGAGATGTCGCCAGACGCTATCCGGGG CGTCTACCCCGGCGTAACCTACCAGCTCGGTAATCTGCTGGCGGCGTTCAACCTTCCTATTCAAGAGCGTCTGGCCGAAT CCCATGGCTACCCCTTCGCCTTGGCCGCGACGATCGTGCCCGTGCTATTGGTCGTAGCGGTGCTGACGGCGATTGGCAAG GATGCCACCGGAATCCGCTTTGGTACTACGGAAACTGCTTTTCTTGTTCGTCATCGAAATCGACATTAG
Upstream 100 bases:
>100_bases AAAGGCACCATTGCCCGATCCTGCCACGGACATGCGAGCCGCCGCTGTTCGCCATGTCCCCGGACTCGCGGTGCCGCGCC CGGTACGCCACGATGCAGAC
Downstream 100 bases:
>100_bases CGCGGTGTCTTCTCGTCGAACTTTGTCGCGCTGCTGTCGATTTCGCCGTCGCTAGGGTGAGCCCGGGATACCGCTCAGGG TGCGCCGCAGCAGGTGCATC
Product: putative sialic acid-transport integral membrane protein nanT
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MAAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMRPVGALLFGLWADRVGRRVPL MVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGLGAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVM NWLGLSWRWLFGLSIIPALISLIIRYRVKESEVWEAAQDRMRLTKTRIRDVLGNPAIVRRFVYLVLLMTAFNWMSHGTQD VYPTFLTATTDHGAGLSSLTARWIVVIYNIGAIIGGLAFGTLSQRFSRRYTIVFCAALGLPIVPLFAYSRTAAMLCLGSF LMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLLAAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGK DATGIRFGTTETAFLVRHRNRH
Sequences:
>Translated_422_residues MAAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMRPVGALLFGLWADRVGRRVPL MVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGLGAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVM NWLGLSWRWLFGLSIIPALISLIIRYRVKESEVWEAAQDRMRLTKTRIRDVLGNPAIVRRFVYLVLLMTAFNWMSHGTQD VYPTFLTATTDHGAGLSSLTARWIVVIYNIGAIIGGLAFGTLSQRFSRRYTIVFCAALGLPIVPLFAYSRTAAMLCLGSF LMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLLAAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGK DATGIRFGTTETAFLVRHRNRH >Mature_421_residues AAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMRPVGALLFGLWADRVGRRVPLM VDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGLGAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVMN WLGLSWRWLFGLSIIPALISLIIRYRVKESEVWEAAQDRMRLTKTRIRDVLGNPAIVRRFVYLVLLMTAFNWMSHGTQDV YPTFLTATTDHGAGLSSLTARWIVVIYNIGAIIGGLAFGTLSQRFSRRYTIVFCAALGLPIVPLFAYSRTAAMLCLGSFL MQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLLAAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGKD ATGIRFGTTETAFLVRHRNRH
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI87082231, Length=452, Percent_Identity=28.0973451327434, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI87082404, Length=352, Percent_Identity=24.4318181818182, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788292, Length=334, Percent_Identity=28.4431137724551, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790550, Length=437, Percent_Identity=23.3409610983982, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786229, Length=200, Percent_Identity=26.5, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082159, Length=139, Percent_Identity=32.3741007194245, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789941, Length=461, Percent_Identity=26.0303687635575, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322632, Length=439, Percent_Identity=28.9293849658314, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46453; Mature: 46322
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PVGALLFGLWADRVGRRVPLMVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGL HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC GAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVMNWLGLSWRWLFGLSIIPALI CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SLIIRYRVKESEVWEAAQDRMRLTKTRIRDVLGNPAIVRRFVYLVLLMTAFNWMSHGTQD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC VYPTFLTATTDHGAGLSSLTARWIVVIYNIGAIIGGLAFGTLSQRFSRRYTIVFCAALGL CCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PIVPLFAYSRTAAMLCLGSFLMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHH AAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGKDATGIRFGTTETAFLVRHRN HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCC RH CC >Mature Secondary Structure AAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PVGALLFGLWADRVGRRVPLMVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGL HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC GAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVMNWLGLSWRWLFGLSIIPALI CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SLIIRYRVKESEVWEAAQDRMRLTKTRIRDVLGNPAIVRRFVYLVLLMTAFNWMSHGTQD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC VYPTFLTATTDHGAGLSSLTARWIVVIYNIGAIIGGLAFGTLSQRFSRRYTIVFCAALGL CCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC PIVPLFAYSRTAAMLCLGSFLMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCCCHHHHHHHHH AAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGKDATGIRFGTTETAFLVRHRN HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCC RH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]