| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is dtd [H]
Identifier: 121637803
GI number: 121637803
Start: 2145436
End: 2145867
Strand: Reverse
Name: dtd [H]
Synonym: BCG_1936c
Alternate gene names: 121637803
Gene position: 2145867-2145436 (Counterclockwise)
Preceding gene: 121637805
Following gene: 121637802
Centisome position: 49.05
GC content: 66.67
Gene sequence:
>432_bases GTGCGGGTTCTGGTGCAACGGGTCTCATCGGCTGCGGTGAGGGTCGATGGTCGGGTGGTCGGCGCTATCCGGCCGGACGG GCAGGGCCTGGTCGCGTTCGTCGGTGTCACCCACGGCGACGATCTCGACAAGGCGCGCCGTCTCGCCGAAAAGCTCTGGA ATTTGCGGGTTCTCGCCGGCGAGAAATCCGCCTCCGACATGCACGCACCGATCCTGGTAATCAGCCAGTTCACCCTCTAC GCAGATACCGCGAAGGGTCGGCGACCGTCCTGGAACGCCGCGGCGCCAGGTGCGGTGGCGCAGCCCCTGATAGCAGCGTT CGCGGCAGCGCTGCGCCAGTTGGGAGCGCACGTGGAAGCCGGCGTGTTCGGTGCCCACATGCAGGTCGAACTGGTCAACG ACGGTCCGGTGACCGTAATGCTGGAAGGCTGA
Upstream 100 bases:
>100_bases CCACGCCCAGCGGGGTGACGGAAAACGCGACCAGCACAGACACACAATGAGCCTACCCAGCCCCAGCGACTGCATAGCCG GCCTGGCAGCATCGAGGCTC
Downstream 100 bases:
>100_bases TGAGATGACTACACCTGAGTATGGCTCGCTTCGTTCCGATGACGACCACTGGGACATTGTCAGCAACGTGGGCTACACCG CGCTACTGGTTGCGGGTTGG
Product: D-tyrosyl-tRNA(Tyr) deacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRVLVQRVSSAAVRVDGRVVGAIRPDGQGLVAFVGVTHGDDLDKARRLAEKLWNLRVLAGEKSASDMHAPILVISQFTLY ADTAKGRRPSWNAAAPGAVAQPLIAAFAAALRQLGAHVEAGVFGAHMQVELVNDGPVTVMLEG
Sequences:
>Translated_143_residues MRVLVQRVSSAAVRVDGRVVGAIRPDGQGLVAFVGVTHGDDLDKARRLAEKLWNLRVLAGEKSASDMHAPILVISQFTLY ADTAKGRRPSWNAAAPGAVAQPLIAAFAAALRQLGAHVEAGVFGAHMQVELVNDGPVTVMLEG >Mature_143_residues MRVLVQRVSSAAVRVDGRVVGAIRPDGQGLVAFVGVTHGDDLDKARRLAEKLWNLRVLAGEKSASDMHAPILVISQFTLY ADTAKGRRPSWNAAAPGAVAQPLIAAFAAALRQLGAHVEAGVFGAHMQVELVNDGPVTVMLEG
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]
COG id: COG1490
COG function: function code J; D-Tyr-tRNAtyr deacylase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTD family [H]
Homologues:
Organism=Homo sapiens, GI30795227, Length=150, Percent_Identity=36.6666666666667, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790320, Length=147, Percent_Identity=40.8163265306122, Blast_Score=105, Evalue=1e-24, Organism=Caenorhabditis elegans, GI115533292, Length=151, Percent_Identity=36.4238410596026, Blast_Score=88, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319982, Length=151, Percent_Identity=35.7615894039735, Blast_Score=99, Evalue=3e-22, Organism=Drosophila melanogaster, GI281361569, Length=150, Percent_Identity=38.6666666666667, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003732 [H]
Pfam domain/function: PF02580 Tyr_Deacylase [H]
EC number: NA
Molecular weight: Translated: 15059; Mature: 15059
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLVQRVSSAAVRVDGRVVGAIRPDGQGLVAFVGVTHGDDLDKARRLAEKLWNLRVLAG CHHHHHHHHHHEEEECCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEC EKSASDMHAPILVISQFTLYADTAKGRRPSWNAAAPGAVAQPLIAAFAAALRQLGAHVEA CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GVFGAHMQVELVNDGPVTVMLEG CEEECEEEEEEECCCCEEEEEEC >Mature Secondary Structure MRVLVQRVSSAAVRVDGRVVGAIRPDGQGLVAFVGVTHGDDLDKARRLAEKLWNLRVLAG CHHHHHHHHHHEEEECCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEC EKSASDMHAPILVISQFTLYADTAKGRRPSWNAAAPGAVAQPLIAAFAAALRQLGAHVEA CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC GVFGAHMQVELVNDGPVTVMLEG CEEECEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]