| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637739
Identifier: 121637739
GI number: 121637739
Start: 2083558
End: 2085591
Strand: Reverse
Name: 121637739
Synonym: BCG_1871c
Alternate gene names: NA
Gene position: 2085591-2083558 (Counterclockwise)
Preceding gene: 121637740
Following gene: 121637738
Centisome position: 47.68
GC content: 65.44
Gene sequence:
>2034_bases ATGGGTAGGCACAGCAAGCCCGACCCCGAGGATTCCGTTGACGACCTGTCCGACGGGCATGCGGCGGAACAACAGCACTG GGAGGACATATCGGGTAGCTACGACTATCCCGGTGTAGATCAGCCCGATGACGGCCCGTTATCCAGCGAGGGCCACTACT CCGCCGTCGGCGGCTACTCGGCTAGCGGCTCAGAAGACTACCCTGACATTCCACCCCGCCCCGACTGGGAGCCAACGGGT GCCGAGCCCATAGCGGCCGCCCCGCCGCCGCTGTTTCGCTTCGGACATCGGGGGCCCGGCGACTGGCAGGCCGGGCACCG TAGCGCGGACGGGCGGCGGGGAGTCAGTATCGGCGTGATCGTGGCCCTTGTCGCAGTGGTGGTAATGGTGGCCGGGGTGA TCTTGTGGTGCTTCTTCGGTGACGCGTTGTCCAACCGCTCGCATACGGCTGCCGCCCGCTGCGTGGGCGGCAAGGACACC GTCGCTGTTATAGCCGACCCATCAATCGCCGATCAGGTAAAGGAGTCAGCCGACAGCTACAACGCGTCGGCGGGCCCGGT CGGCGACCGTTGTGTGGCAGTGGCTGTCACCTCGGCCGGCTCCGATGCCGTCATCAATGGTTTCATCGGCAAATGGCCGA CCGAACTGGGCGGCCAGCCGGGATTGTGGATTCCGAGTAGCTCCATCTCGGCGGCGCGGCTTACCGGGGCCGCGGGCAGC CAAGCCATTAGCGATAGCCGCTCACTGGTGATATCGCCGGTGTTGCTCGCCGTGCGGCCCGAATTGCAGCAGGCCCTCGC CAACCAGAACTGGGCGGCGTTGCCCGGCCTGCAAACCAATCCGAACTCGTTGTCCGGCTTGGACTTGCCTGCCTGGGGAT CACTGCGGCTGGCAATGCCGAGCAGTGGCAACGGCGATGCCGCGTATTTGGCCGGCGAGGCGGTGGCTGCCGCGTCAGCA CCTGCTGGCGCGCCAGCAACAGCGGGTATCGGCGCGGTGCGCACCCTGATGGGCGCACGACCTAAGCTCGCCGACGACTC CTTGACCGCGGCGATGGACACGCTGCTCAAGCCCGGCGATGTCGCCACGGCACCCGTGCACGCGGTGGTCACCACCGAAC AACAGTTGTTCCAGCGCGGCCAGTCACTTTCAGATGCCGAGAACACCTTGGGTTCCTGGCTGCCGCCGGGGCCGGCTGCG GTCGCTGACTATCCGACGGTGCTGCTCAGTGGTGCATGGCTATCGCAGGAGCAAACGTCGGCGGCCAGCGCGTTTGCCAG GTATTTGCACAAGCCCGAGCAACTGGCCAAACTGGCCAGAGCTGGTTTCCGAGTCAGCGACGTCAAACCGCCGAGCAGCC CCGTCACCAGTTTCCCAGCGCTGCCTTCGACTTTGTCGGTGGGTGACGACTCCATGCGCGCGACCCTGGCGGACACCATG GTCACCGCGTCGGCCGGAGTGGCCGCGACCATCATGCTCGACCAATCGATGCCCAATGATGAAGGCGGCAATAGCCGGCT TAGCAATGTCGTTGCGGCGCTTGAGAACCGGATCAAGGCGATGCCGCCCAGTTCGGTCGTCGGACTGTGGACATTCGACG GCCGCGAGGGCCGAACAGAGGTGCCGGCCGGGCCATTGGCCGACCCGGTCAACGGCCAGCCCCGCCCCGCGGCCTTGACG GCCGCGTTGGGCAAGCAATACTCCTCGGGCGGTGGCGCGGTGTCGTTCACCACTCTGCGCTTGATCTATCAGGAGATGCT AGCCAATTACCATGTTGGCCAGGCTAATTCTGTGCTGGTTATTACCGCGGGGCCGCATACGGACCAAACCCTCGACGGGC CGGGCCTGCAGGATTTCATCCGCAAGAGCGCAGACCCGGCCAAGCCGATCGCGGTCAACATCATCGACTTCGGTGCTGAT CCCGATCGGGCAACCTGGGAAGCCGTCGCACAGCTCAGCGGCGGCAGCTACCAAAACCTGGAGACATCGGCATCCCCCGA CCTGGCAACCGCGGTCAACATCTTCTTGAGCTGA
Upstream 100 bases:
>100_bases CGCCCGCTTGCGGGAGAGAGCCGGCCCCATCGGGCAGAGCCGGTGCGTAGCTCGTGCTTGACAGGCGCCGGCCTTCGACG GAGAGGACGCAGACGCCGGT
Downstream 100 bases:
>100_bases TCGCCTGGCTACCCGATGACCAGACGCGGCGGCTCGGATGCGGCCTGGTACTCCGCGCCGGACCAACGATCCGCCTACCC GAGATATCGTGGGATGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MGRHSKPDPEDSVDDLSDGHAAEQQHWEDISGSYDYPGVDQPDDGPLSSEGHYSAVGGYSASGSEDYPDIPPRPDWEPTG AEPIAAAPPPLFRFGHRGPGDWQAGHRSADGRRGVSIGVIVALVAVVVMVAGVILWCFFGDALSNRSHTAAARCVGGKDT VAVIADPSIADQVKESADSYNASAGPVGDRCVAVAVTSAGSDAVINGFIGKWPTELGGQPGLWIPSSSISAARLTGAAGS QAISDSRSLVISPVLLAVRPELQQALANQNWAALPGLQTNPNSLSGLDLPAWGSLRLAMPSSGNGDAAYLAGEAVAAASA PAGAPATAGIGAVRTLMGARPKLADDSLTAAMDTLLKPGDVATAPVHAVVTTEQQLFQRGQSLSDAENTLGSWLPPGPAA VADYPTVLLSGAWLSQEQTSAASAFARYLHKPEQLAKLARAGFRVSDVKPPSSPVTSFPALPSTLSVGDDSMRATLADTM VTASAGVAATIMLDQSMPNDEGGNSRLSNVVAALENRIKAMPPSSVVGLWTFDGREGRTEVPAGPLADPVNGQPRPAALT AALGKQYSSGGGAVSFTTLRLIYQEMLANYHVGQANSVLVITAGPHTDQTLDGPGLQDFIRKSADPAKPIAVNIIDFGAD PDRATWEAVAQLSGGSYQNLETSASPDLATAVNIFLS
Sequences:
>Translated_677_residues MGRHSKPDPEDSVDDLSDGHAAEQQHWEDISGSYDYPGVDQPDDGPLSSEGHYSAVGGYSASGSEDYPDIPPRPDWEPTG AEPIAAAPPPLFRFGHRGPGDWQAGHRSADGRRGVSIGVIVALVAVVVMVAGVILWCFFGDALSNRSHTAAARCVGGKDT VAVIADPSIADQVKESADSYNASAGPVGDRCVAVAVTSAGSDAVINGFIGKWPTELGGQPGLWIPSSSISAARLTGAAGS QAISDSRSLVISPVLLAVRPELQQALANQNWAALPGLQTNPNSLSGLDLPAWGSLRLAMPSSGNGDAAYLAGEAVAAASA PAGAPATAGIGAVRTLMGARPKLADDSLTAAMDTLLKPGDVATAPVHAVVTTEQQLFQRGQSLSDAENTLGSWLPPGPAA VADYPTVLLSGAWLSQEQTSAASAFARYLHKPEQLAKLARAGFRVSDVKPPSSPVTSFPALPSTLSVGDDSMRATLADTM VTASAGVAATIMLDQSMPNDEGGNSRLSNVVAALENRIKAMPPSSVVGLWTFDGREGRTEVPAGPLADPVNGQPRPAALT AALGKQYSSGGGAVSFTTLRLIYQEMLANYHVGQANSVLVITAGPHTDQTLDGPGLQDFIRKSADPAKPIAVNIIDFGAD PDRATWEAVAQLSGGSYQNLETSASPDLATAVNIFLS >Mature_676_residues GRHSKPDPEDSVDDLSDGHAAEQQHWEDISGSYDYPGVDQPDDGPLSSEGHYSAVGGYSASGSEDYPDIPPRPDWEPTGA EPIAAAPPPLFRFGHRGPGDWQAGHRSADGRRGVSIGVIVALVAVVVMVAGVILWCFFGDALSNRSHTAAARCVGGKDTV AVIADPSIADQVKESADSYNASAGPVGDRCVAVAVTSAGSDAVINGFIGKWPTELGGQPGLWIPSSSISAARLTGAAGSQ AISDSRSLVISPVLLAVRPELQQALANQNWAALPGLQTNPNSLSGLDLPAWGSLRLAMPSSGNGDAAYLAGEAVAAASAP AGAPATAGIGAVRTLMGARPKLADDSLTAAMDTLLKPGDVATAPVHAVVTTEQQLFQRGQSLSDAENTLGSWLPPGPAAV ADYPTVLLSGAWLSQEQTSAASAFARYLHKPEQLAKLARAGFRVSDVKPPSSPVTSFPALPSTLSVGDDSMRATLADTMV TASAGVAATIMLDQSMPNDEGGNSRLSNVVAALENRIKAMPPSSVVGLWTFDGREGRTEVPAGPLADPVNGQPRPAALTA ALGKQYSSGGGAVSFTTLRLIYQEMLANYHVGQANSVLVITAGPHTDQTLDGPGLQDFIRKSADPAKPIAVNIIDFGADP DRATWEAVAQLSGGSYQNLETSASPDLATAVNIFLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69605; Mature: 69474
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHSKPDPEDSVDDLSDGHAAEQQHWEDISGSYDYPGVDQPDDGPLSSEGHYSAVGGYS CCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC ASGSEDYPDIPPRPDWEPTGAEPIAAAPPPLFRFGHRGPGDWQAGHRSADGRRGVSIGVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH VALVAVVVMVAGVILWCFFGDALSNRSHTAAARCVGGKDTVAVIADPSIADQVKESADSY HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHC NASAGPVGDRCVAVAVTSAGSDAVINGFIGKWPTELGGQPGLWIPSSSISAARLTGAAGS CCCCCCCCCCEEEEEEECCCCCCEEECHHHCCCHHHCCCCCEECCCCCCCHHHHCCCCCC QAISDSRSLVISPVLLAVRPELQQALANQNWAALPGLQTNPNSLSGLDLPAWGSLRLAMP HHHHCCCCEEHHHHHHHHCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECC SSGNGDAAYLAGEAVAAASAPAGAPATAGIGAVRTLMGARPKLADDSLTAAMDTLLKPGD CCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC VATAPVHAVVTTEQQLFQRGQSLSDAENTLGSWLPPGPAAVADYPTVLLSGAWLSQEQTS CCCCCEEEEEECHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCHHHHH AASAFARYLHKPEQLAKLARAGFRVSDVKPPSSPVTSFPALPSTLSVGDDSMRATLADTM HHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH VTASAGVAATIMLDQSMPNDEGGNSRLSNVVAALENRIKAMPPSSVVGLWTFDGREGRTE HHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC VPAGPLADPVNGQPRPAALTAALGKQYSSGGGAVSFTTLRLIYQEMLANYHVGQANSVLV CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEE ITAGPHTDQTLDGPGLQDFIRKSADPAKPIAVNIIDFGADPDRATWEAVAQLSGGSYQNL EEECCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC ETSASPDLATAVNIFLS CCCCCCCHHHHHHHHCC >Mature Secondary Structure GRHSKPDPEDSVDDLSDGHAAEQQHWEDISGSYDYPGVDQPDDGPLSSEGHYSAVGGYS CCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC ASGSEDYPDIPPRPDWEPTGAEPIAAAPPPLFRFGHRGPGDWQAGHRSADGRRGVSIGVI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH VALVAVVVMVAGVILWCFFGDALSNRSHTAAARCVGGKDTVAVIADPSIADQVKESADSY HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHC NASAGPVGDRCVAVAVTSAGSDAVINGFIGKWPTELGGQPGLWIPSSSISAARLTGAAGS CCCCCCCCCCEEEEEEECCCCCCEEECHHHCCCHHHCCCCCEECCCCCCCHHHHCCCCCC QAISDSRSLVISPVLLAVRPELQQALANQNWAALPGLQTNPNSLSGLDLPAWGSLRLAMP HHHHCCCCEEHHHHHHHHCHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEECC SSGNGDAAYLAGEAVAAASAPAGAPATAGIGAVRTLMGARPKLADDSLTAAMDTLLKPGD CCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC VATAPVHAVVTTEQQLFQRGQSLSDAENTLGSWLPPGPAAVADYPTVLLSGAWLSQEQTS CCCCCEEEEEECHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCHHHHH AASAFARYLHKPEQLAKLARAGFRVSDVKPPSSPVTSFPALPSTLSVGDDSMRATLADTM HHHHHHHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHH VTASAGVAATIMLDQSMPNDEGGNSRLSNVVAALENRIKAMPPSSVVGLWTFDGREGRTE HHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC VPAGPLADPVNGQPRPAALTAALGKQYSSGGGAVSFTTLRLIYQEMLANYHVGQANSVLV CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEE ITAGPHTDQTLDGPGLQDFIRKSADPAKPIAVNIIDFGADPDRATWEAVAQLSGGSYQNL EEECCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCC ETSASPDLATAVNIFLS CCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]