| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637681
Identifier: 121637681
GI number: 121637681
Start: 2013691
End: 2015484
Strand: Reverse
Name: 121637681
Synonym: BCG_1812c
Alternate gene names: NA
Gene position: 2015484-2013691 (Counterclockwise)
Preceding gene: 121637683
Following gene: 121637680
Centisome position: 46.07
GC content: 68.62
Gene sequence:
>1794_bases ATGTGCGCCCACGAATATGCTGAGCAGCGCTCGGCCGTGTCCGGAATCGAGGGGCTGCTTACCTGGCTCGGCGGCGGACA CTGGCGCGAACTCGGCGAGCGTCACGAGCGGTCCACGCACGCCGTGGCCGGCGTGATTGTGGCCGTGGGCGCCGCGCTGG CCGGACTCCTCGCGAGCCTCGCGGTGAGCGAGGCGGCCCAGGGGCCGATCTCGTCCCCCATCGGGGCTGCCTCGCTCGCC CTGGTGCTCGGCCTGCTGGTCGGCGCGGTGACCCGCGGTACGGCCAGTGGCCCAGCTCGCGGTCGGGCCGGCGTTACGGG ACGCGCGTCCGTCGCGGTCGCCGTCGGTTTCGTCGTCGGCGAACTCGCTGCGCTGGTCATGTTTTCCGGTGCCATCGACC GCCGTCTCGATGAACAAGCTATGCACAGCGCCGACGCGACGCCGGCGGCCGTGCAAGCGTCGGCCTCCCTGCAACAGGCC CGCAATGCGCGCACTGCGCTGGACAGCGCGGTCGAGCGGGCGCGCGGACGACTGGACGATGCGCTGGTCGTCGCACGCTG CGAATACCACCCAACTCCGGCCTGCCCGCAGACCCGGATCACCGGCGTTCCCGGCCGAGGGCCCGAAACACGAACGGCGA ACCAGCTTCTCGCCGACGCGCAGCGTGAGCTGGACAACGCGCTGGCGGCTCGTGATCACCAAGCACCTGCCTTGGACGCC AAAATGGCACACGACGAGCAGGCTCTTGCCGAGGTGCGCCAGGCCGTGGTCGCGGATGCGGGTCGTGGTTTGGGCTCGCG CTGGGTCGCCATGAACGATCTGACATTGGCCAGCGCCGGCGCCTTGACGGCGCGAATGCTGGCGATCGCTTTCTTCGCGC TGCTGTACCTATTGCCGCTGATTCTCCGGCTATGGCGCGGTGACACAACGCACGATCGCCACGCGGCCGCGCGAGCGGAA CGGGAGCGCGCCGAGTTGGAGGCGGACACCGCGATCGCGATCAAGCGGGCGGAGGTTCGCCGGGCCGCCGAAATCATGTG GGCCGAGCACCAACTCACCCAGACCCGCCTCGCCATCGAGGCCCAGGCCGAAATCGACCGCGAACAGCAACGCCGCCGAG TCGTCGAAGCGCTCGAAGGTCCAGTGCGCGCTTCGTCGGAGCGAACCTTGCAGCCAGTGGAGGACGAGGTGTATCTGCCC ATCGCCGCCGAAACCGAAGCTGCCAGCCGGACGGTCGCCCAATTGCCTGCTGGGGCAGCCCATCACCGCCCCGGTATCGC GAAAAACCTGCCGGCACAGGTCCAACCGGAGGGTGCGGTTGAACCACGCGAGAAGCGTGCAACCCCAGTGATCCGGTCGA TCCCAGACGCCACCAAGGCTGCGGCTCGGTGGATTCGCCCACTGGTGCCGCCGTTTGTCGCACGAATGCTCGACAACACC ACTGCGCCGTTGCGCACCGCGCGTCAGGTGTTCGAAGAGGTCGAGGAGATCGCGTTTTCGTTCAAGCGCACCCACAAGGT GACGGTCAATGCCGAAGGTTCCGACCCCAACGACCAGCCCCCGCTGGAATCCCACTCCCCGGCTGCCCCTGCCGAAAGCA ACCCGATCGCATCGTCGGACTCTGCGCGCCGTAGCCGGCTGGCTACCAACGATGATCACCCGCCGTTAGCGCAGGTGCCT CCGCGAGACCTGGCGAGCCTATCAGTTGGGTCAACCGGGGAGCTGACCCAACGGGAGGGTCCGCATGAACTGCGTTCCCC CGACGGTCCGCGCCAGCTGCCACCGCCCAGATAG
Upstream 100 bases:
>100_bases CTCTCGCGCAGTTGTGAACAACACCACAAGGGGCCGCTTCGATTCGGTGTGTCGGGCGGGGGCCTGCCAGGCTTGACCAG CAGGAGGTGTTTTCAGTCTC
Downstream 100 bases:
>100_bases CACAACATAGATCTACCGGTCGCCACGTATTATCCTGCCGTCGGGATGGAGTCAGTCTAAGTGGGTGCGGTATTGACCGA CCTTCGGCTAGTTGCACATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVGAALAGLLASLAVSEAAQGPISSPIGAASLA LVLGLLVGAVTRGTASGPARGRAGVTGRASVAVAVGFVVGELAALVMFSGAIDRRLDEQAMHSADATPAAVQASASLQQA RNARTALDSAVERARGRLDDALVVARCEYHPTPACPQTRITGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDA KMAHDEQALAEVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPLILRLWRGDTTHDRHAAARAE RERAELEADTAIAIKRAEVRRAAEIMWAEHQLTQTRLAIEAQAEIDREQQRRRVVEALEGPVRASSERTLQPVEDEVYLP IAAETEAASRTVAQLPAGAAHHRPGIAKNLPAQVQPEGAVEPREKRATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT TAPLRTARQVFEEVEEIAFSFKRTHKVTVNAEGSDPNDQPPLESHSPAAPAESNPIASSDSARRSRLATNDDHPPLAQVP PRDLASLSVGSTGELTQREGPHELRSPDGPRQLPPPR
Sequences:
>Translated_597_residues MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVGAALAGLLASLAVSEAAQGPISSPIGAASLA LVLGLLVGAVTRGTASGPARGRAGVTGRASVAVAVGFVVGELAALVMFSGAIDRRLDEQAMHSADATPAAVQASASLQQA RNARTALDSAVERARGRLDDALVVARCEYHPTPACPQTRITGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDA KMAHDEQALAEVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPLILRLWRGDTTHDRHAAARAE RERAELEADTAIAIKRAEVRRAAEIMWAEHQLTQTRLAIEAQAEIDREQQRRRVVEALEGPVRASSERTLQPVEDEVYLP IAAETEAASRTVAQLPAGAAHHRPGIAKNLPAQVQPEGAVEPREKRATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT TAPLRTARQVFEEVEEIAFSFKRTHKVTVNAEGSDPNDQPPLESHSPAAPAESNPIASSDSARRSRLATNDDHPPLAQVP PRDLASLSVGSTGELTQREGPHELRSPDGPRQLPPPR >Mature_597_residues MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVGAALAGLLASLAVSEAAQGPISSPIGAASLA LVLGLLVGAVTRGTASGPARGRAGVTGRASVAVAVGFVVGELAALVMFSGAIDRRLDEQAMHSADATPAAVQASASLQQA RNARTALDSAVERARGRLDDALVVARCEYHPTPACPQTRITGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDA KMAHDEQALAEVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPLILRLWRGDTTHDRHAAARAE RERAELEADTAIAIKRAEVRRAAEIMWAEHQLTQTRLAIEAQAEIDREQQRRRVVEALEGPVRASSERTLQPVEDEVYLP IAAETEAASRTVAQLPAGAAHHRPGIAKNLPAQVQPEGAVEPREKRATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT TAPLRTARQVFEEVEEIAFSFKRTHKVTVNAEGSDPNDQPPLESHSPAAPAESNPIASSDSARRSRLATNDDHPPLAQVP PRDLASLSVGSTGELTQREGPHELRSPDGPRQLPPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63512; Mature: 63512
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVGAALAGLLASL CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSEAAQGPISSPIGAASLALVLGLLVGAVTRGTASGPARGRAGVTGRASVAVAVGFVVG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ELAALVMFSGAIDRRLDEQAMHSADATPAAVQASASLQQARNARTALDSAVERARGRLDD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ALVVARCEYHPTPACPQTRITGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDA HHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH KMAHDEQALAEVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILRLWRGDTTHDRHAAARAERERAELEADTAIAIKRAEVRRAAEIMWAEHQLTQTRLAIE HHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAEIDREQQRRRVVEALEGPVRASSERTLQPVEDEVYLPIAAETEAASRTVAQLPAGAA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCC HHRPGIAKNLPAQVQPEGAVEPREKRATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC TAPLRTARQVFEEVEEIAFSFKRTHKVTVNAEGSDPNDQPPLESHSPAAPAESNPIASSD CHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC SARRSRLATNDDHPPLAQVPPRDLASLSVGSTGELTQREGPHELRSPDGPRQLPPPR HHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MCAHEYAEQRSAVSGIEGLLTWLGGGHWRELGERHERSTHAVAGVIVAVGAALAGLLASL CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVSEAAQGPISSPIGAASLALVLGLLVGAVTRGTASGPARGRAGVTGRASVAVAVGFVVG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ELAALVMFSGAIDRRLDEQAMHSADATPAAVQASASLQQARNARTALDSAVERARGRLDD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ALVVARCEYHPTPACPQTRITGVPGRGPETRTANQLLADAQRELDNALAARDHQAPALDA HHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH KMAHDEQALAEVRQAVVADAGRGLGSRWVAMNDLTLASAGALTARMLAIAFFALLYLLPL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILRLWRGDTTHDRHAAARAERERAELEADTAIAIKRAEVRRAAEIMWAEHQLTQTRLAIE HHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAEIDREQQRRRVVEALEGPVRASSERTLQPVEDEVYLPIAAETEAASRTVAQLPAGAA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCC HHRPGIAKNLPAQVQPEGAVEPREKRATPVIRSIPDATKAAARWIRPLVPPFVARMLDNT CCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC TAPLRTARQVFEEVEEIAFSFKRTHKVTVNAEGSDPNDQPPLESHSPAAPAESNPIASSD CHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC SARRSRLATNDDHPPLAQVPPRDLASLSVGSTGELTQREGPHELRSPDGPRQLPPPR HHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA