| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637672
Identifier: 121637672
GI number: 121637672
Start: 2005526
End: 2006314
Strand: Reverse
Name: 121637672
Synonym: BCG_1803c
Alternate gene names: NA
Gene position: 2006314-2005526 (Counterclockwise)
Preceding gene: 121637673
Following gene: 121637671
Centisome position: 45.86
GC content: 62.36
Gene sequence:
>789_bases ATGCAATCAAGCTCGCTCGATCCAGTAGCCAGCGAACGGCTGTCGCACGCTGAGAAGTCATTCACGTCCGACTTGTCGAT CAACGAGTTCGCATTGCTGCATGGGGCCGGGTTTGAGCCCATCGAGCTGGTCATGGGTGTCTCGGTCTATCACGTCGGCT TCCAATTCAGCGGCATGAGGCAGCAACAGGAACTGGGTGTCCTCACCGAGGCGACATACCGGGCGCGCTGGAATGCGATG GCGCGCATGCAGGCCGAAGCCGATGCCCTCAAAGCGGACGGGATCGTCGGTGTCCGGCTCAACTGGCGCCACCATGGGGA GGGCGGGGAACACCTTGAGTTCATGGCGGTCGGTACCGCAGTGCGATACACCGCCAAGCCCGGAGCATTTCGGCGTCCCA ACGGCCAAGCATTCTCCAGTCATCTATCCGGCCAGGACATGGTGACGCTGCTGCGATCCGGGTTTGCGCCGGTGGCGTTC GTGATGGGCAATTGCGTATTCCACATCGCCGTGCAGGGATTCATGCAAACGCTTCGCCAGATCGGCCGCAACATGGAGAT GCCACAGTGGACGCAAGGCAACTACCAAGCGCGTGAGCTGGCAATGTCACGCATGCAGAGCGAGGCCGAGCGAGACGGCG CAACCGGCGTGGTGGGCGTGCACTTCGCCATCTCGAACTACGCGTGGGGAGTGCACACGGTGGAGTTCTACACCGCGGGA ACCGCCGTGCGCCGCACCGGCAGCGGGGAAACGATCACACCGTCATTCGTCCTGCCGATGGACAGCTGA
Upstream 100 bases:
>100_bases CGGCGCCAAGACGCCGCCGATGCCCTGGGGACGCTGATGGCAGACGCTGCATGGTTTGCGCGTCGTACGCTGACACACAC CACAGGAAGGACGCACAACG
Downstream 100 bases:
>100_bases TGTCTGATTTCGATACCGAGCGAGTGAGCCGCGCCGTCGCGGCCGCGCTCGTCGGTCCCGGCGGTGTCGCGTTGGTGGTC AAAGTGTTCGCCGGACTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MQSSSLDPVASERLSHAEKSFTSDLSINEFALLHGAGFEPIELVMGVSVYHVGFQFSGMRQQQELGVLTEATYRARWNAM ARMQAEADALKADGIVGVRLNWRHHGEGGEHLEFMAVGTAVRYTAKPGAFRRPNGQAFSSHLSGQDMVTLLRSGFAPVAF VMGNCVFHIAVQGFMQTLRQIGRNMEMPQWTQGNYQARELAMSRMQSEAERDGATGVVGVHFAISNYAWGVHTVEFYTAG TAVRRTGSGETITPSFVLPMDS
Sequences:
>Translated_262_residues MQSSSLDPVASERLSHAEKSFTSDLSINEFALLHGAGFEPIELVMGVSVYHVGFQFSGMRQQQELGVLTEATYRARWNAM ARMQAEADALKADGIVGVRLNWRHHGEGGEHLEFMAVGTAVRYTAKPGAFRRPNGQAFSSHLSGQDMVTLLRSGFAPVAF VMGNCVFHIAVQGFMQTLRQIGRNMEMPQWTQGNYQARELAMSRMQSEAERDGATGVVGVHFAISNYAWGVHTVEFYTAG TAVRRTGSGETITPSFVLPMDS >Mature_262_residues MQSSSLDPVASERLSHAEKSFTSDLSINEFALLHGAGFEPIELVMGVSVYHVGFQFSGMRQQQELGVLTEATYRARWNAM ARMQAEADALKADGIVGVRLNWRHHGEGGEHLEFMAVGTAVRYTAKPGAFRRPNGQAFSSHLSGQDMVTLLRSGFAPVAF VMGNCVFHIAVQGFMQTLRQIGRNMEMPQWTQGNYQARELAMSRMQSEAERDGATGVVGVHFAISNYAWGVHTVEFYTAG TAVRRTGSGETITPSFVLPMDS
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28755; Mature: 28755
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSSLDPVASERLSHAEKSFTSDLSINEFALLHGAGFEPIELVMGVSVYHVGFQFSGMR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCEEEECEEECCCC QQQELGVLTEATYRARWNAMARMQAEADALKADGIVGVRLNWRHHGEGGEHLEFMAVGTA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEECEE VRYTAKPGAFRRPNGQAFSSHLSGQDMVTLLRSGFAPVAFVMGNCVFHIAVQGFMQTLRQ EEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGRNMEMPQWTQGNYQARELAMSRMQSEAERDGATGVVGVHFAISNYAWGVHTVEFYTAG HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECC TAVRRTGSGETITPSFVLPMDS HHEEECCCCCEECCEEEEECCC >Mature Secondary Structure MQSSSLDPVASERLSHAEKSFTSDLSINEFALLHGAGFEPIELVMGVSVYHVGFQFSGMR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCEEEECEEECCCC QQQELGVLTEATYRARWNAMARMQAEADALKADGIVGVRLNWRHHGEGGEHLEFMAVGTA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCEEEEEEECEE VRYTAKPGAFRRPNGQAFSSHLSGQDMVTLLRSGFAPVAFVMGNCVFHIAVQGFMQTLRQ EEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGRNMEMPQWTQGNYQARELAMSRMQSEAERDGATGVVGVHFAISNYAWGVHTVEFYTAG HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEECC TAVRRTGSGETITPSFVLPMDS HHEEECCCCCEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA