| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is lipH [H]
Identifier: 121637329
GI number: 121637329
Start: 1599638
End: 1600597
Strand: Reverse
Name: lipH [H]
Synonym: BCG_1460c
Alternate gene names: 121637329
Gene position: 1600597-1599638 (Counterclockwise)
Preceding gene: 121637330
Following gene: 121637328
Centisome position: 36.59
GC content: 67.92
Gene sequence:
>960_bases ATGACAGAGCCGACCGTCGCCCGGCCTGATATCGATCCCGTGCTGAAGATGCTGCTCGATACCTTTCCGGTGACCTTCAC CGCGGCCGACGGTGTCGAAGTCGCCCGCGCGCGGCTCCGCCAGCTGAAGACACCCGCGGAGTTGCTGCCGGAGCTACGGA TCGAGGAACGGACCGTTGGCTACGACGGGCTCACCGACATTCCGGTCCGCGTCTACTGGCCGCCGGTCGTTCGCGACAAC CTGCCCGTGGTTGTCTACTACCACGGTGGCGGCTGGTCGCTCGGCGGTCTGGACACCCACGACCCCGTCGCCCGCGCCCA CGCCGTCGGCGCGCAGGCCATCGTGGTGTCCGTCGACTACCGGCTTGCCCCGGAACATCCCTACCCGGCCGGGATCGACG ACAGCTGGGCGGCATTGCGCTGGGTCGGCGAAAACGCCGCCGAACTGGGCGGTGACCCGAGCCGGATCGCCGTGGCCGGT GACTCTGCGGGCGGCAACATCTCGGCGGTCATGGCGCAGTTGGCCCGGGATGTCGGCGGACCGCCGCTGGTGTTCCAGCT GCTGTGGTACCCGACGACCATGGCCGACCTGTCGCTGCCGTCTTTCACCGAAAATGCCGATGCGCCAATCCTGGACCGTG ACGTCATCGACGCGTTCCTGGCCTGGTATGTGCCGGGGCTGGACATCAGTGATCACACGATGCTGCCCACGACACTGGCC CCGGGAAACGCTGACCTGTCCGGCCTGCCTCCCGCCTTCATCGGCACCGCCGAGCATGATCCGCTGCGCGACGACGGTGC TTGCTACGCCGAATTGCTCACGGCCGCAGGGGTTTCCGTAGAGCTAAGCAACGAGCCCACCATGGTGCACGGCTACGTCA ACTTCGCCCTGGTGGTGCCCGCCGCGGCCGAAGCCACCGGCCGCGGCTTGGCGGCGCTGAAGAGGGCGTTGCACGCATAA
Upstream 100 bases:
>100_bases TGCCGGTGTGGTGCCCGCCGCCACCGAGGCCACCAACCGTGGGCTGGTGGCGCTACGGGTTGTGCTACACGGATAGGCCT GGCGGTCGTACGGTAGGCCC
Downstream 100 bases:
>100_bases CGTCGGCGGCATGCCCGGTCGGCTGAATCGCCGCCCGCCGCGGTGCCGCCCGGGCCGCACATTGTGATGTATGATATGGT GTATGAAGCGGACCAACATC
Product: putative lipase lipH
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPAELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDN LPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAG DSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLA PGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA
Sequences:
>Translated_319_residues MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPAELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDN LPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAG DSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLA PGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA >Mature_318_residues TEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPAELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDNL PVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGD SAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAP GNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=304, Percent_Identity=31.25, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI68051721, Length=300, Percent_Identity=32, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI68299767, Length=302, Percent_Identity=30.4635761589404, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI226423947, Length=308, Percent_Identity=31.1688311688312, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI226423952, Length=244, Percent_Identity=31.1475409836066, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI226423950, Length=244, Percent_Identity=31.1475409836066, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI157041239, Length=282, Percent_Identity=27.3049645390071, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI61966717, Length=327, Percent_Identity=25.9938837920489, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI21328446, Length=152, Percent_Identity=32.2368421052632, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI68508957, Length=103, Percent_Identity=36.8932038834951, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI68508967, Length=103, Percent_Identity=36.8932038834951, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI68508965, Length=103, Percent_Identity=36.8932038834951, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786682, Length=248, Percent_Identity=30.241935483871, Blast_Score=95, Evalue=7e-21, Organism=Caenorhabditis elegans, GI72001146, Length=140, Percent_Identity=35.7142857142857, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71996133, Length=140, Percent_Identity=39.2857142857143, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17540028, Length=195, Percent_Identity=30.2564102564103, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17567059, Length=160, Percent_Identity=33.75, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115533410, Length=144, Percent_Identity=29.8611111111111, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533412, Length=144, Percent_Identity=29.8611111111111, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24656084, Length=86, Percent_Identity=37.2093023255814, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24656076, Length=86, Percent_Identity=37.2093023255814, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI20130169, Length=86, Percent_Identity=37.2093023255814, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 33881; Mature: 33750
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPAELLPELRIEERTVG CCCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHCCCHHHCCC YDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDY CCCCCCCCEEEEECCHHCCCCCEEEEEECCCEECCCCCCCCHHHHHHHCCCEEEEEEEEE RLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGG EECCCCCCCCCCCCCCHHEEEECCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC PPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLA CHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEEC PGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVP CCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEC AAAEATGRGLAALKRALHA CCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKTPAELLPELRIEERTVG CCCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHHHHHHCCCHHHCCC YDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDY CCCCCCCCEEEEECCHHCCCCCEEEEEECCCEECCCCCCCCHHHHHHHCCCEEEEEEEEE RLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGG EECCCCCCCCCCCCCCHHEEEECCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC PPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLA CHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEEC PGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVP CCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEEC AAAEATGRGLAALKRALHA CCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]