| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637308
Identifier: 121637308
GI number: 121637308
Start: 1576388
End: 1577815
Strand: Reverse
Name: 121637308
Synonym: BCG_1439c
Alternate gene names: NA
Gene position: 1577815-1576388 (Counterclockwise)
Preceding gene: 121637323
Following gene: 121637307
Centisome position: 36.07
GC content: 69.61
Gene sequence:
>1428_bases ATGGGAAACCTTGACCTCCTTCTCCGCCTCTCTGGACGGATCGTTAAAGGATGTCGACCGCTCGGCAGCGTAGCACTCGC ACGCTGCGGGCCCGCGGTGCGGTGGCCGTGGTGGCCCAGGCCTGCTATACTCGAACACATGTTCGATTTAGTGAGCCTCG CGGGCGTGGATTCGCGCGACGATGAGGCGAGCCTGACCGCGCGGATCGCCGAGCTGGAGCGGGTCAAATCGGCCGCGGCC GCCGGTCAGGCACGTGCTGCGGCGGCGCTGGACAAGTTGCGTCGCTGCAATGAGGCGGATGCGGGGGTGCCGGCACGGCG GCGCGGGCGTGGGGTGGCCAGTGAAGTAGCGCTGGCGCGACGGGATTCGCCGGCGCGCGGCGGGCGCCACCTGGGGTTCG CGAAGGCGTTGGTGTATGAGATGCCGCACACACTCGCCGCGCTCGAGGTCGGGCGGCTATCGGAGTGGCGGGCCACGCTG ATCGTGCGGGAGTCGGCCTGCCTGGACGTCGAGGATCGCCGCGCACTCGACGCCGAGCTGTGCGCCGACATGTCCGCATT GGACGGGATGGGTGATGCGCGGATCGCCGCCGCGGCCCGGGCGATTGCCTACCGGCTCGATGCCCAGGCGGTGGTGGAGC GGGCCGCCAGGGCCGAGACCGAACGCACGGTGACGATCCGCCCGGCCCCCGACACCATGACCTGGGTGACGGCGTTGCTT CCGGTGGCCCGAGGCGTGTCGGTCTATGCGGCGCTCAAGCGGGCCGCCGACACGACATTCGACGATCGGACACGGGGCCA GGTAATGGCCGACACGTTGGTCGAGCGGGTCACCGGACAACCCGCCGAGGCGGCCCAACCGGTAGCGGTCAACCTGGTGC TCTCCGACGAGACACTGTTAGCTGGCGACCGCGCCCCGGCGGTGGTCGACGGGTATGGCCCCATCCCGGCGGCCGTGGCC CGCAACCTGGTGCGCGACGCGGTTGCCGATACGCGGTCACGGGCCACGCTGCGCCGGCTCTACCGTCATCCGCGCTCGGG GGCCTTGGTGGCGATGGAATCGCGGGCACGCCGGTTCCCGAAGGGGCTGGCCGCGTTCATCGGGTTGCGCGATCAGCGCT GTCGCATGCCCTACTGCGATGCCCCGATCCGCCACCGTGACCACGCCCAGCCGCATCATCGAGGCGGCCCGACCACCGCG ACCAACGGCCTCGGATCGTGTGAACGCTGTAACTACGTCAAGGAAGCTCCCGGCTGGCGCGTCAGCACCGACACGGACGA AACCGGCCGTCACACAGCTGAATTCACCACGCCCACCGGGATGTACTATCACTGCACCGCGCCACCACTGCCCGGGCCGT TGGAGATAGACGTTAGCCAGGTGGAAGCCAGAATCGGTGTCGCCCTCACCCACCTACACGCCGCCTAA
Upstream 100 bases:
>100_bases GATAATCTGATGCGCGATGCGCGAAATCGTGCGGCCGACGTCGGCCGCGGACATCAACTCGCGGGACTCCCGGCCGATTG CGGCATCACCCGCAGCACCC
Downstream 100 bases:
>100_bases GCTGGCCAGCATGCCAGGTATAGATTTCGACGCGCTCTACCGTGGCGAAAGCCCCGGCGAGGGCCTCCCGCCGATCACGA CACCGCCGTGGGACACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Endonuclease; HNH Endonuclease Domain-Containing Protein
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAA AGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATL IVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVA RNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTA TNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA
Sequences:
>Translated_475_residues MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAA AGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATL IVRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVA RNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTA TNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA >Mature_474_residues GNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAA GQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLI VRESACLDVEDRRALDAELCADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALLP VARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVAR NLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTAT NGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51286; Mature: 51155
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD CCCCEEEEECCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHH RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHEEEEEECCCCCCCHHHHHHHHHH CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL HHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEE AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCE VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA EECCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNLDLLLRLSGRIVKGCRPLGSVALARCGPAVRWPWWPRPAILEHMFDLVSLAGVDSRD CCCEEEEECCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC DEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHH RDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAEL CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHEEEEEECCCCCCCHHHHHHHHHH CADMSALDGMGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRPAPDTMTWVTALL HHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH PVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLL HHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEE AGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRLYRHPRSGALVAMESRARRFP CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH KGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHCCCCCE VSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA EECCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA