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The map label for this gene is fadM [H]

Identifier: 121637119

GI number: 121637119

Start: 1362305

End: 1363294

Strand: Direct

Name: fadM [H]

Synonym: BCG_1250

Alternate gene names: 121637119

Gene position: 1362305-1363294 (Clockwise)

Preceding gene: 121637118

Following gene: 121637120

Centisome position: 31.14

GC content: 69.29

Gene sequence:

>990_bases
ATGGCCGGCTGGTTCGCGCACACGCTGCGCCCGGCAATGCTTGCCGCCGGCCGCTCGGATCGGCTGGGCCGCATCGTCGA
GCGCTCGCCGCTCACCCGCGGGGTGGTGCGCCGGTTCGTGCCCGGCGACACGCTCGACGACGTGGTGGATATCGTTACCG
CGCTGCGGGATTCGGGCCGCTACCTCAGCATCGACTACCTGGGCGAGAACGTCACCGATGCCGACGACGCTGCCGCCGCC
GTGCGGGCGTACCTGGGGCTCTTGGACGTGCTGGGCCGCCGCGGCGATATCGCATGCGACGGGGTGCGACCGCTCGAGGT
GTCGCTCAAGCTGTCGGCGCTCGGGCAGGCCCTCGATCGCGACGGCCAGAAGATCGCGCTGGACAACGCCCGCGCCATCT
GTGAGCGGGCCGAGCGGGTGGGCGCCTGGGTCACGGTGGACGCCGAAGACCACACCACCACCGATTCCACATTGTCGATA
TCGGGCGATTTGCGCGTCGACTTTCCTTGGCTGGGCACGGTTGTGCAGGCCTATCTGCGGCGCACGCTGGCCGATTGCGC
GGAGTTGGCGGCCGTGGGCGCCCGAGTCCGGTTGTGCAAGGGCGCCTATGACGAACCCGCATCGGTGGCCTACCGAGACG
CCGCGCAGGTCACCGACTCCTATCTGCGGTGCCTTCGGGTATTGACGGCGGGGCGAGGCTATCCGATGGTGGCCACCCAC
GACCCGGTGATCATCGCGGCGGTACCGGGGATCACGCGCGAATCAGGGCGTAGTCAAGGTGATTTCGAATACCAGATGCT
CTACGGCGTCCGCGACGACGAACAACGACGACTGACCGGCGCCGGTAACCACGTGCGGGTGTATGTGCCCTTCGGCACCC
GGTGGTACGGGTATTTCCTGCGGCGGCTGGCCGAACGCCCGGCCAACCTGGCGTTCTTCCTGCGGGCGCTGACCGACCGC
CGACGCGCGCGGGGGTGCGCCGAGCGCTGA

Upstream 100 bases:

>100_bases
GTTCGCCGTTGAACCTGCTGCGGTGGACGTCGGCGCGCAGCATCAAGGAGACGTTCGTCGCGGCCACCGACCACATCTAC
CCGCACATGGCGGTCGACTG

Downstream 100 bases:

>100_bases
AATCGCCGGTTGCTGTCACATTCGGCGGGGCTGTCTCGTCCTTGATGTTATGAATTCCAGCATGGGTCGGCGGGAGGACA
CATGTCGCAACACGACCCGG

Product: putative proline dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MAGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAA
VRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSI
SGDLRVDFPWLGTVVQAYLRRTLADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATH
DPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFLRRLAERPANLAFFLRALTDR
RRARGCAER

Sequences:

>Translated_329_residues
MAGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAA
VRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSI
SGDLRVDFPWLGTVVQAYLRRTLADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATH
DPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFLRRLAERPANLAFFLRALTDR
RRARGCAER
>Mature_328_residues
AGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGRYLSIDYLGENVTDADDAAAAV
RAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDRDGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSIS
GDLRVDFPWLGTVVQAYLRRTLADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATHD
PVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFLRRLAERPANLAFFLRALTDRR
RARGCAER

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=350, Percent_Identity=27.7142857142857, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 36238; Mature: 36106

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGR
CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
YLSIDYLGENVTDADDAAAAVRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDR
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEHHHHHHHHCC
DGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVDFPWLGTVVQAYLR
CCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCEEECCCHHHHHHHHHHH
RTLADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
DPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFL
CCEEEEECCCCCHHCCCCCCCEEEEEEECCCCCHHHHHCCCCCEEEEEECCCCHHHHHHH
RRLAERPANLAFFLRALTDRRRARGCAER
HHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGWFAHTLRPAMLAAGRSDRLGRIVERSPLTRGVVRRFVPGDTLDDVVDIVTALRDSGR
CCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
YLSIDYLGENVTDADDAAAAVRAYLGLLDVLGRRGDIACDGVRPLEVSLKLSALGQALDR
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEHHHHHHHHCC
DGQKIALDNARAICERAERVGAWVTVDAEDHTTTDSTLSISGDLRVDFPWLGTVVQAYLR
CCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCEEECCCHHHHHHHHHHH
RTLADCAELAAVGARVRLCKGAYDEPASVAYRDAAQVTDSYLRCLRVLTAGRGYPMVATH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
DPVIIAAVPGITRESGRSQGDFEYQMLYGVRDDEQRRLTGAGNHVRVYVPFGTRWYGYFL
CCEEEEECCCCCHHCCCCCCCEEEEEEECCCCCHHHHHCCCCCEEEEEECCCCHHHHHHH
RRLAERPANLAFFLRALTDRRRARGCAER
HHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA