| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637073
Identifier: 121637073
GI number: 121637073
Start: 1298762
End: 1299610
Strand: Direct
Name: 121637073
Synonym: BCG_1202
Alternate gene names: NA
Gene position: 1298762-1299610 (Clockwise)
Preceding gene: 121637069
Following gene: 121637076
Centisome position: 29.69
GC content: 64.55
Gene sequence:
>849_bases ATGCCGCGAGATTACACCGCCCCTCGCTGGGCCCACGCCTGGGCCGGTGAACCCCGGCCCGCCCGCTGGCACCCTGCGAA CCAGCCTGCACATCCTGACCACTCCAACCGCGAAAGTCCGGCCTGCATGAGCCAATCCACCACTCCATACCGCAGCAGCG TGCTTGCCGAGTTTCGTCGTGCGATCACCAATGTCGCTGTGCCCCATCATGAACCGCCGGGAATCGTGCGCCGCCGCCGT GTGGTCGTCGGCGTCACGTTGGTTATCGGCGCTGTGATGCTGGGCTTTTCGCTGAGGCGGACGCCCGGCGAGTCGAGCTT TTACTGGCTGACGCTCGCGCTGGCAGCCGTGTGGATCGCCGGCGCACTGATGTCTGGACCGCTGCATCTGGGTGGCATCT GTTGGCGCGGTCGCAATCAGCGTCCGGTCATCACCGGGACCACTGTCGGGCTGCTGCTAGCAGGCATCTTCGGGGTGGGT GCAATGATCGTCAGGGCAATTCCTGGCGCAGCTGAACCGATAGCCCGCGTCCTGCAATTCGCCCATCAGGGAACTCTGCT GCCGATCCTGCTGATCACCTTGATTAACGGCATCGCCGAGGAGATGTTCTTTCGCGGTGCGCTCTACACCGCGCTGGGAC GACGCTATCCGGTGACCATCTCAACCGTCCTGTACGTCGGCGCCACCATGGCCAGCGCGAATCTGATGCTCGGCTTCGCA GCGATCTTCGTCGGTACGGTGTGTGCGTTGGAGCGCCGGGCCAGCGGTGGAGTGCTGGCACCGATCTTGACCCACTTCGT GTGGGGCCTGATCATGGTGTTCGCGCTGCCCCCGCTGTTCGCGGTCTGA
Upstream 100 bases:
>100_bases CGTATCGTCGCCGCGCTAGGTTGGACGCTGTGCGGATCGTGGTGAGCAGTGCCACCAGAAATGCGGGTTCGTACACCTGT GTCAGCACCGGCAGCGCTGG
Downstream 100 bases:
>100_bases CGCGCGTTCAGGAACCGGTGAAGTTGGGGGTGCGGCGTTGCAGGAACGCCGCTGCGCCCTCGGCGAAGTCGTGTGTTCGC AGCAGGACTTCCTGTCCATC
Product: putative integral membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Caax Amino Protease Family Protein; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPYRSSVLAEFRRAITNVAVPHHEPPGIVRRRR VVVGVTLVIGAVMLGFSLRRTPGESSFYWLTLALAAVWIAGALMSGPLHLGGICWRGRNQRPVITGTTVGLLLAGIFGVG AMIVRAIPGAAEPIARVLQFAHQGTLLPILLITLINGIAEEMFFRGALYTALGRRYPVTISTVLYVGATMASANLMLGFA AIFVGTVCALERRASGGVLAPILTHFVWGLIMVFALPPLFAV
Sequences:
>Translated_282_residues MPRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPYRSSVLAEFRRAITNVAVPHHEPPGIVRRRR VVVGVTLVIGAVMLGFSLRRTPGESSFYWLTLALAAVWIAGALMSGPLHLGGICWRGRNQRPVITGTTVGLLLAGIFGVG AMIVRAIPGAAEPIARVLQFAHQGTLLPILLITLINGIAEEMFFRGALYTALGRRYPVTISTVLYVGATMASANLMLGFA AIFVGTVCALERRASGGVLAPILTHFVWGLIMVFALPPLFAV >Mature_281_residues PRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPYRSSVLAEFRRAITNVAVPHHEPPGIVRRRRV VVGVTLVIGAVMLGFSLRRTPGESSFYWLTLALAAVWIAGALMSGPLHLGGICWRGRNQRPVITGTTVGLLLAGIFGVGA MIVRAIPGAAEPIARVLQFAHQGTLLPILLITLINGIAEEMFFRGALYTALGRRYPVTISTVLYVGATMASANLMLGFAA IFVGTVCALERRASGGVLAPILTHFVWGLIMVFALPPLFAV
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30426; Mature: 30295
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPYRSSVLAEFRR CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHH AITNVAVPHHEPPGIVRRRRVVVGVTLVIGAVMLGFSLRRTPGESSFYWLTLALAAVWIA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHH GALMSGPLHLGGICWRGRNQRPVITGTTVGLLLAGIFGVGAMIVRAIPGAAEPIARVLQF HHHHCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AHQGTLLPILLITLINGIAEEMFFRGALYTALGRRYPVTISTVLYVGATMASANLMLGFA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIFVGTVCALERRASGGVLAPILTHFVWGLIMVFALPPLFAV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRDYTAPRWAHAWAGEPRPARWHPANQPAHPDHSNRESPACMSQSTTPYRSSVLAEFRR CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHH AITNVAVPHHEPPGIVRRRRVVVGVTLVIGAVMLGFSLRRTPGESSFYWLTLALAAVWIA HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHH GALMSGPLHLGGICWRGRNQRPVITGTTVGLLLAGIFGVGAMIVRAIPGAAEPIARVLQF HHHHCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AHQGTLLPILLITLINGIAEEMFFRGALYTALGRRYPVTISTVLYVGATMASANLMLGFA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AIFVGTVCALERRASGGVLAPILTHFVWGLIMVFALPPLFAV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA