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The map label for this gene is yafJ [C]

Identifier: 121636990

GI number: 121636990

Start: 1214501

End: 1215364

Strand: Direct

Name: yafJ [C]

Synonym: BCG_1119

Alternate gene names: 121636990

Gene position: 1214501-1215364 (Clockwise)

Preceding gene: 121636989

Following gene: 121636991

Centisome position: 27.76

GC content: 63.54

Gene sequence:

>864_bases
ATGTGCCGACTCTTTGGCTTGCACTCCGGAACCGATGCTGTCACCGCGACGTTTTGGTTGCTGAACGCCTCGGATAGCCT
GGCCGAGCAAAGCCGACGAAACCCCGACGGCACCGGCCTTGGTGTATTCGACGAACACCACCAGCCGCGGCTACACAAGC
AACCAATAGCGGCCTGGCAAGACGCCGACTTCGCCACCGAAGCCCACGAGCTGACCGGCACGACGTTCGTCGCCCATGTT
CGCTACGCGACGACCGGGTCGCTCGACATCCGCAATACCCACCCATTCCTGCAAGACGGGCGGATCTTCGCACACAATGG
GGTGGTCGAAGGACTGGATGTCCTCGACGAACGGCTGCGCGAGGTCGGCGCCGATGACCTGGTGTTGGGCCAGACCGACT
CCGAGCGCGTATTCGCTTTGATCACCGCTTCGATCCGCGCCCGGGACGGCAACGAATCAGCCGGTCTGATTGACGCGCTG
AGGTGGCTCGCGGCGAATGTGCCGATCTATGCCGTCAACGTGTTGCTCAGCACCGCGACCGATGTATGGGCACTGCGGTA
TCCGGAGTCCCACGAGCTGTATATCTTGGACCGCCGCGGCGACGGTGCGCCCGAGTTCCACTTGCGAAGCAAGCGAATCC
GCGCACACTCGACGCACTTGCGCGAACGGTCGTCGGTGGTGTTCGCGACTGAACCGATGGATGACAACCCGCGTTGGCGC
CTGCTGGACGCGGGGGAGCTGGTCCACGTGGACGCCGCCCTGCGGGTCAACAGGAGTCTGGTGCTACCTGATCCACCCAG
ACATCCGATTCGCCGGGAAGATCTCAGCGAGCCGGTACTGCATGCGCAACACACGTCGGCGTGA

Upstream 100 bases:

>100_bases
CGCCAGGATGTGGCGGGGCTACGCGCGCGGGGTGCTCGAGAAGCTTTCCGCTTTGTTGGTGGGCTGAGCGGCGCTGCCGG
CTTCGTCTACCGTCGGGGTC

Downstream 100 bases:

>100_bases
ACTCGTGACAACTAGACGCGCGCTGGTATTGGCCGGCGGAGGACTGGCCGGAATCGCCTGGGAAACAGGTGTTTTGCGCG
GCATCGCGGACGAATCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRRNPDGTGLGVFDEHHQPRLHKQPIAAWQDADFATEAHELTGTTFVAHV
RYATTGSLDIRNTHPFLQDGRIFAHNGVVEGLDVLDERLREVGADDLVLGQTDSERVFALITASIRARDGNESAGLIDAL
RWLAANVPIYAVNVLLSTATDVWALRYPESHELYILDRRGDGAPEFHLRSKRIRAHSTHLRERSSVVFATEPMDDNPRWR
LLDAGELVHVDAALRVNRSLVLPDPPRHPIRREDLSEPVLHAQHTSA

Sequences:

>Translated_287_residues
MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRRNPDGTGLGVFDEHHQPRLHKQPIAAWQDADFATEAHELTGTTFVAHV
RYATTGSLDIRNTHPFLQDGRIFAHNGVVEGLDVLDERLREVGADDLVLGQTDSERVFALITASIRARDGNESAGLIDAL
RWLAANVPIYAVNVLLSTATDVWALRYPESHELYILDRRGDGAPEFHLRSKRIRAHSTHLRERSSVVFATEPMDDNPRWR
LLDAGELVHVDAALRVNRSLVLPDPPRHPIRREDLSEPVLHAQHTSA
>Mature_287_residues
MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRRNPDGTGLGVFDEHHQPRLHKQPIAAWQDADFATEAHELTGTTFVAHV
RYATTGSLDIRNTHPFLQDGRIFAHNGVVEGLDVLDERLREVGADDLVLGQTDSERVFALITASIRARDGNESAGLIDAL
RWLAANVPIYAVNVLLSTATDVWALRYPESHELYILDRRGDGAPEFHLRSKRIRAHSTHLRERSSVVFATEPMDDNPRWR
LLDAGELVHVDAALRVNRSLVLPDPPRHPIRREDLSEPVLHAQHTSA

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017808
- InterPro:   IPR017932 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32038; Mature: 32038

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRRNPDGTGLGVFDEHHQPRLHKQPIAAWQ
CEEEEECCCCCCCEEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DADFATEAHELTGTTFVAHVRYATTGSLDIRNTHPFLQDGRIFAHNGVVEGLDVLDERLR
CCCCHHHHHHHCCCEEEEEEEEEECCCEEECCCCCCHHCCEEEEECCCHHHHHHHHHHHH
EVGADDLVLGQTDSERVFALITASIRARDGNESAGLIDALRWLAANVPIYAVNVLLSTAT
HCCCCCEEECCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHCCC
DVWALRYPESHELYILDRRGDGAPEFHLRSKRIRAHSTHLRERSSVVFATEPMDDNPRWR
CEEEEECCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE
LLDAGELVHVDAALRVNRSLVLPDPPRHPIRREDLSEPVLHAQHTSA
EEECCCEEEEEEEEEECCEEECCCCCCCCCCHHHCCCCHHCCCCCCC
>Mature Secondary Structure
MCRLFGLHSGTDAVTATFWLLNASDSLAEQSRRNPDGTGLGVFDEHHQPRLHKQPIAAWQ
CEEEEECCCCCCCEEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DADFATEAHELTGTTFVAHVRYATTGSLDIRNTHPFLQDGRIFAHNGVVEGLDVLDERLR
CCCCHHHHHHHCCCEEEEEEEEEECCCEEECCCCCCHHCCEEEEECCCHHHHHHHHHHHH
EVGADDLVLGQTDSERVFALITASIRARDGNESAGLIDALRWLAANVPIYAVNVLLSTAT
HCCCCCEEECCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHHCCC
DVWALRYPESHELYILDRRGDGAPEFHLRSKRIRAHSTHLRERSSVVFATEPMDDNPRWR
CEEEEECCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEE
LLDAGELVHVDAALRVNRSLVLPDPPRHPIRREDLSEPVLHAQHTSA
EEECCCEEEEEEEEEECCEEECCCCCCCCCCHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]