| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636759
Identifier: 121636759
GI number: 121636759
Start: 962704
End: 963426
Strand: Reverse
Name: 121636759
Synonym: BCG_0888c
Alternate gene names: NA
Gene position: 963426-962704 (Counterclockwise)
Preceding gene: 121636760
Following gene: 121636757
Centisome position: 22.02
GC content: 68.33
Gene sequence:
>723_bases ATGCTCGTCGGGGCACAGTGCCGCGATCTACTGCACTGGCGCTTCTGCCGCGGGGTGCCGCCGCGGGCCACCAACGACAC CGATATCGCAGGGACCCTGAACAATTGGGACCACTTCGAGGCAATTCGGGCCACCTTCCGCGCCCTGGGCAGCACCGGGC ACCGATTCCTGATCGCCGACCGCGCCGTCGATGCCCTCCCGTTCGGCGAGGTGGAGTCGCCCACCGGCACAACCCGCCAT CCCCCAGGCAACCAGCTCATGAACGTCCACGGATGCACCGACGCCTACCTGCGTGCCGATGTTCTGCCTCTCCCTGGCGG CCTGACAGTCCACCTTCCCCAACCGCCGAACTATGCGGTCCTCAAACTGCACGCATGGCTCGATCGGTCCGCGGACCACG ACTACAAAGACGGCCCAGATCTGGCCTTGGTGGTGCACTGGTACGCCGGCGACCTCGACCGGCTTTACGCCAAACCAGAC CAGTGGGCGCTACGCCGTCACGACTTCGACCTACGCACCGCCGCTGCCGCGCTGCTCGGCCACGACATGCGCGCCAGTGT CAGCGCACCGGAGGCCGCCGTGCTGGCGACGCGCGCCACACAGGCCGACCACGACCTGCTGGCCCAGCACTTCGCCGTGG GTCGACCGGGCTGGCCCACCACCACAGCTTCGCGGCGCCCTCTGGTCGAGGCGTTACTCGACCAGCTCACGCCGGGCTCC TAA
Upstream 100 bases:
>100_bases AGGCAGGATGAGCGACTCGCCCGATTATGACCCGGTCCTCCTGGCCTGGGTGACACCGATCGTCACAGCACTTGCCGACG TCGTGCCGGCTGAACAGCTG
Downstream 100 bases:
>100_bases ATGCGAACCGCAATCACAAATGTACGTTCTCAAACGGCGCGTCATACAGAATTGGTTAGGCAGGGTGGTAGTCGGGATCA ATGAAGGCCGCCACGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLVGAQCRDLLHWRFCRGVPPRATNDTDIAGTLNNWDHFEAIRATFRALGSTGHRFLIADRAVDALPFGEVESPTGTTRH PPGNQLMNVHGCTDAYLRADVLPLPGGLTVHLPQPPNYAVLKLHAWLDRSADHDYKDGPDLALVVHWYAGDLDRLYAKPD QWALRRHDFDLRTAAAALLGHDMRASVSAPEAAVLATRATQADHDLLAQHFAVGRPGWPTTTASRRPLVEALLDQLTPGS
Sequences:
>Translated_240_residues MLVGAQCRDLLHWRFCRGVPPRATNDTDIAGTLNNWDHFEAIRATFRALGSTGHRFLIADRAVDALPFGEVESPTGTTRH PPGNQLMNVHGCTDAYLRADVLPLPGGLTVHLPQPPNYAVLKLHAWLDRSADHDYKDGPDLALVVHWYAGDLDRLYAKPD QWALRRHDFDLRTAAAALLGHDMRASVSAPEAAVLATRATQADHDLLAQHFAVGRPGWPTTTASRRPLVEALLDQLTPGS >Mature_240_residues MLVGAQCRDLLHWRFCRGVPPRATNDTDIAGTLNNWDHFEAIRATFRALGSTGHRFLIADRAVDALPFGEVESPTGTTRH PPGNQLMNVHGCTDAYLRADVLPLPGGLTVHLPQPPNYAVLKLHAWLDRSADHDYKDGPDLALVVHWYAGDLDRLYAKPD QWALRRHDFDLRTAAAALLGHDMRASVSAPEAAVLATRATQADHDLLAQHFAVGRPGWPTTTASRRPLVEALLDQLTPGS
Specific function: Unknown
COG id: COG4849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26362; Mature: 26362
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGAQCRDLLHWRFCRGVPPRATNDTDIAGTLNNWDHFEAIRATFRALGSTGHRFLIAD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC RAVDALPFGEVESPTGTTRHPPGNQLMNVHGCTDAYLRADVLPLPGGLTVHLPQPPNYAV CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCEECCCCEEEECCCCCCEEE LKLHAWLDRSADHDYKDGPDLALVVHWYAGDLDRLYAKPDQWALRRHDFDLRTAAAALLG EEEEEHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHC HDMRASVSAPEAAVLATRATQADHDLLAQHFAVGRPGWPTTTASRRPLVEALLDQLTPGS CCHHCCCCCCCHHEEEHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MLVGAQCRDLLHWRFCRGVPPRATNDTDIAGTLNNWDHFEAIRATFRALGSTGHRFLIAD CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC RAVDALPFGEVESPTGTTRHPPGNQLMNVHGCTDAYLRADVLPLPGGLTVHLPQPPNYAV CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCEECCCCEEEECCCCCCEEE LKLHAWLDRSADHDYKDGPDLALVVHWYAGDLDRLYAKPDQWALRRHDFDLRTAAAALLG EEEEEHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHHC HDMRASVSAPEAAVLATRATQADHDLLAQHFAVGRPGWPTTTASRRPLVEALLDQLTPGS CCHHCCCCCCCHHEEEHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA