Click here to switch to the map view.

The map label for this gene is sseC2

Identifier: 121636738

GI number: 121636738

Start: 938603

End: 938905

Strand: Reverse

Name: sseC2

Synonym: BCG_0866c

Alternate gene names: NA

Gene position: 938905-938603 (Counterclockwise)

Preceding gene: 121636739

Following gene: 121636737

Centisome position: 21.46

GC content: 68.65

Gene sequence:

>303_bases
ATGTGCTCTGGACCCAAGCAAGGACTGACATTGCCGGCCAGCGTCGACCTGGAAAAAGAAACGGTGATCACCGGCCGCGT
AGTGGACGGTGACGGCCAGGCCGTGGGCGGCGCGTTCGTGCGGCTGCTGGACTCCTCCGACGAGTTCACCGCGGAGGTCG
TCGCGTCGGCCACCGGCGATTTCCGGTTCTTCGCCGCGCCCGGATCCTGGACGCTGCGCGCGCTGTCGGCGGCCGGCAAC
GGCGACGCGGTGGTGCAGCCCTCGGGCGCGGGCATCCACGAGGTAGACGTCAAGATCACCTGA

Upstream 100 bases:

>100_bases
TTGCGGGAATTACTCGGACACCAAAACGTCAAGAACTACGACGGCAGTTGGACAGAATACGGCTCCCTGGTGGGCGCCCC
GATCGAGTTGGGAAGCTGAT

Downstream 100 bases:

>100_bases
CCGGCCCCAATCAGGCCCAGACGAGCCAGGGCCACGGAAGCGGCCGCGGCCGCATACACTCGTCCCCGTGGTGCTGTTCT
TCGAGATCATGCTGGTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGN
GDAVVQPSGAGIHEVDVKIT

Sequences:

>Translated_100_residues
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGN
GDAVVQPSGAGIHEVDVKIT
>Mature_100_residues
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGDFRFFAAPGSWTLRALSAAGN
GDAVVQPSGAGIHEVDVKIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3118_MYCTU (P0CG96)

Other databases:

- EMBL:   BX842582
- RefSeq:   NP_215329.1
- RefSeq:   YP_177930.1
- EnsemblBacteria:   EBMYCT00000000494
- GeneID:   885435
- GeneID:   888809
- GenomeReviews:   AL123456_GR
- KEGG:   mtu:Rv3118
- TubercuList:   Rv3118
- GeneTree:   EBGT00050000017082
- HOGENOM:   HBG565795
- OMA:   APKQGLT
- InterPro:   IPR013784
- InterPro:   IPR014766
- InterPro:   IPR010814
- Gene3D:   G3DSA:2.60.40.1120

Pfam domain/function: PF07210 DUF1416; SSF49452 CBD_4

EC number: NA

Molecular weight: Translated: 10165; Mature: 10165

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
CCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCC
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT
EEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MCSGPKQGLTLPASVDLEKETVITGRVVDGDGQAVGGAFVRLLDSSDEFTAEVVASATGD
CCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCC
FRFFAAPGSWTLRALSAAGNGDAVVQPSGAGIHEVDVKIT
EEEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230