| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is cpsY
Identifier: 121636730
GI number: 121636730
Start: 930154
End: 931752
Strand: Reverse
Name: cpsY
Synonym: BCG_0858c
Alternate gene names: 121636730
Gene position: 931752-930154 (Counterclockwise)
Preceding gene: 121636734
Following gene: 121636726
Centisome position: 21.3
GC content: 60.6
Gene sequence:
>1599_bases ATGCCCAAAATCTCTTCGCGCGACGGCGGTCGGCCCGCTCAGCGCACCGTGAATCCCATCATCGTTACCCGGCGCGGCAA GATCGCCCGCCTGGAATCCGGCCTGACCCCCCAGGAGGCCCAGATCGAAGATCTGGTCTTTCTGCGAAAGGTGTTAAACA GGGCTGATATTCCCTATCTACTGATCCGAAACCACAAGAACCGGCCGGTGCTTGCCATCAACATCGAACTACGTGCCGGC CTCGAGCGCGCTCTTGCGGCCGCATGTGCAACCGAACCGATGTACGCCAAAACTATTGATGAGCCTGGCCTTTCTCCTGT TTTGGTCGCCACCGACGGGCTGTCGCAGCTGGTTGACCCGCGTGTCGTGCGGTTGTATCGACGCCGGATCGCGCCGGGCG GATTTCGCTACGGCCCGGCGTTCGGTGTGGAACTGCAATTCTGGGTATACGAGGAGACGGTGATCCGCTGCCCTGTCGAA AACTCGCTTAGCCGCAAAGTGCTGCCCCGAAACGAAATAACGCCGACAAATGTCAAACTCTACGGGTACAAATGGCCGAC CCTTGACGGGATGTTTGCCCCGCACGCCAGCGACGTCGTGTTCGACATAGACATGGTGTTCTCCTGGGTGGACGGTAGTG ACCCCGAGTTCCGGGCGCGCCGCATGGCTCAAATGTCGCAGTACGTGGTGGGCGAGGGCGACGACGCCGAAGCGCGGATC CGCCAAATCGACGAGTTGAAATACGCGCTGCGGTCGGTGAACATGTTTGCTCCGTGGATACGTCGCATCTTCATCGCGAC GGATTCAACCCCGCCGCCATGGTTGGCCGAACATCCTAAAATCACCATCGTTCGCGCCGAGGACCACTTTTCCGACCGTT CCGCGTTGCCGACCTATAACTCGCATGCGGTGGAGAGCCAGCTGCACCACATCCCGGGGCTCAGCGAGCACTTCTTGTAC TCCAACGACGACATGTTCTTCGGCCGGCCGCTCAAGGCCAGTATGTTCTTCTCTCCCGGTGGAGTCACCAGGTTCATCGA AGCCAAGACCCGGATCGGGCTCGGCGCCAACAACCCAGCGCGTAGTGGCTTTGAAAACGCGGCCCGGGTGAACCGCCAGC TGCTCTTCGACCGGTTCGGGCAGGTGATTACCCGTCATCTCGAGCACACCGCGGTACCGTTGCGCAAGAGTGTGCTGATC GAGATGGAGCGGGAATTCCCGGAGGAATTCGCCCGCACCGCGGCCAGCCCGTTCCGCTCCGACACCGACATCTCGGTGAC CAACTCGTTCTACCACTATTACGCGCTGATGACCGGACGCGCCGTCCCGCAGGAAAAGGCTAAAGTCCTCTATGTCGACA CCACCAGCTATGCGGGTCTTCGGCTACTTCCTAAGTTGCGGAAGCACCGCGGATACGATTTCTTCTGCCTCAACGACGGT AGCTTTCCTGAAGTCCCCGCAGCGCAGCGCGCAGAACGAGTCGTCAGTTTCCTGGAGCGCTATTTCCCGATACCGGCTCC CTGGGAGAAGATCGCCGCGGACGTCAGTCGACGGGACTTCGCGGTGCCGAGGACGTCAGCACCATCGGAGGGTGCTTGA
Upstream 100 bases:
>100_bases GGACCCCGCGCCAGCGCGGTCAACCTGCGCCGACCCGCGATCTGTGAGATTCTTTCGGTGACCTAATCATTTCTCCCTGA GTTCCCAAGGCGGTGACCCG
Downstream 100 bases:
>100_bases ATAGCGAATCGCGACGCGACGGTTCGATGAAAATGCCGCTCTCGGCGATTTTGCGTCGCGCCTGCCCGGGTGAGACAAAG GTGCCGACCGTTTCTCCGCC
Product: putative udp-glucose-4-epimerase cpsY
Products: NA
Alternate protein names: Stealth protein CpsY
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MPKISSRDGGRPAQRTVNPIIVTRRGKIARLESGLTPQEAQIEDLVFLRKVLNRADIPYLLIRNHKNRPVLAINIELRAG LERALAAACATEPMYAKTIDEPGLSPVLVATDGLSQLVDPRVVRLYRRRIAPGGFRYGPAFGVELQFWVYEETVIRCPVE NSLSRKVLPRNEITPTNVKLYGYKWPTLDGMFAPHASDVVFDIDMVFSWVDGSDPEFRARRMAQMSQYVVGEGDDAEARI RQIDELKYALRSVNMFAPWIRRIFIATDSTPPPWLAEHPKITIVRAEDHFSDRSALPTYNSHAVESQLHHIPGLSEHFLY SNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGANNPARSGFENAARVNRQLLFDRFGQVITRHLEHTAVPLRKSVLI EMEREFPEEFARTAASPFRSDTDISVTNSFYHYYALMTGRAVPQEKAKVLYVDTTSYAGLRLLPKLRKHRGYDFFCLNDG SFPEVPAAQRAERVVSFLERYFPIPAPWEKIAADVSRRDFAVPRTSAPSEGA
Sequences:
>Translated_532_residues MPKISSRDGGRPAQRTVNPIIVTRRGKIARLESGLTPQEAQIEDLVFLRKVLNRADIPYLLIRNHKNRPVLAINIELRAG LERALAAACATEPMYAKTIDEPGLSPVLVATDGLSQLVDPRVVRLYRRRIAPGGFRYGPAFGVELQFWVYEETVIRCPVE NSLSRKVLPRNEITPTNVKLYGYKWPTLDGMFAPHASDVVFDIDMVFSWVDGSDPEFRARRMAQMSQYVVGEGDDAEARI RQIDELKYALRSVNMFAPWIRRIFIATDSTPPPWLAEHPKITIVRAEDHFSDRSALPTYNSHAVESQLHHIPGLSEHFLY SNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGANNPARSGFENAARVNRQLLFDRFGQVITRHLEHTAVPLRKSVLI EMEREFPEEFARTAASPFRSDTDISVTNSFYHYYALMTGRAVPQEKAKVLYVDTTSYAGLRLLPKLRKHRGYDFFCLNDG SFPEVPAAQRAERVVSFLERYFPIPAPWEKIAADVSRRDFAVPRTSAPSEGA >Mature_531_residues PKISSRDGGRPAQRTVNPIIVTRRGKIARLESGLTPQEAQIEDLVFLRKVLNRADIPYLLIRNHKNRPVLAINIELRAGL ERALAAACATEPMYAKTIDEPGLSPVLVATDGLSQLVDPRVVRLYRRRIAPGGFRYGPAFGVELQFWVYEETVIRCPVEN SLSRKVLPRNEITPTNVKLYGYKWPTLDGMFAPHASDVVFDIDMVFSWVDGSDPEFRARRMAQMSQYVVGEGDDAEARIR QIDELKYALRSVNMFAPWIRRIFIATDSTPPPWLAEHPKITIVRAEDHFSDRSALPTYNSHAVESQLHHIPGLSEHFLYS NDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGANNPARSGFENAARVNRQLLFDRFGQVITRHLEHTAVPLRKSVLIE MEREFPEEFARTAASPFRSDTDISVTNSFYHYYALMTGRAVPQEKAKVLYVDTTSYAGLRLLPKLRKHRGYDFFCLNDGS FPEVPAAQRAERVVSFLERYFPIPAPWEKIAADVSRRDFAVPRTSAPSEGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the stealth family
Homologues:
Organism=Homo sapiens, GI38202211, Length=134, Percent_Identity=39.5522388059701, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI28573948, Length=158, Percent_Identity=36.7088607594937, Blast_Score=100, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPSY_MYCBO (Q7U184)
Other databases:
- EMBL: BX248336 - RefSeq: NP_854487.1 - EnsemblBacteria: EBMYCT00000017590 - GeneID: 1092558 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb0829c - GeneTree: EBGT00050000018383 - HOGENOM: HBG696421 - OMA: THNSQAV - ProtClustDB: CLSK790750 - BioCyc: MBOV233413:MB0829C-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60269; Mature: 60137
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKISSRDGGRPAQRTVNPIIVTRRGKIARLESGLTPQEAQIEDLVFLRKVLNRADIPYL CCCCCCCCCCCHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE LIRNHKNRPVLAINIELRAGLERALAAACATEPMYAKTIDEPGLSPVLVATDGLSQLVDP EEECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCHHHHHCH RVVRLYRRRIAPGGFRYGPAFGVELQFWVYEETVIRCPVENSLSRKVLPRNEITPTNVKL HHHHHHHHHCCCCCCCCCCEECCEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCEEE YGYKWPTLDGMFAPHASDVVFDIDMVFSWVDGSDPEFRARRMAQMSQYVVGEGDDAEARI EEEECCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH RQIDELKYALRSVNMFAPWIRRIFIATDSTPPPWLAEHPKITIVRAEDHFSDRSALPTYN HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC SHAVESQLHHIPGLSEHFLYSNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGANNPA CHHHHHHHHHCCCCHHHCEECCCCEEECCCCCCEEEECCCCCEEEEEHHHHCCCCCCCCC RSGFENAARVNRQLLFDRFGQVITRHLEHTAVPLRKSVLIEMEREFPEEFARTAASPFRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DTDISVTNSFYHYYALMTGRAVPQEKAKVLYVDTTSYAGLRLLPKLRKHRGYDFFCLNDG CCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCC SFPEVPAAQRAERVVSFLERYFPIPAPWEKIAADVSRRDFAVPRTSAPSEGA CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PKISSRDGGRPAQRTVNPIIVTRRGKIARLESGLTPQEAQIEDLVFLRKVLNRADIPYL CCCCCCCCCCHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE LIRNHKNRPVLAINIELRAGLERALAAACATEPMYAKTIDEPGLSPVLVATDGLSQLVDP EEECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEECCCHHHHHCH RVVRLYRRRIAPGGFRYGPAFGVELQFWVYEETVIRCPVENSLSRKVLPRNEITPTNVKL HHHHHHHHHCCCCCCCCCCEECCEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCEEE YGYKWPTLDGMFAPHASDVVFDIDMVFSWVDGSDPEFRARRMAQMSQYVVGEGDDAEARI EEEECCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH RQIDELKYALRSVNMFAPWIRRIFIATDSTPPPWLAEHPKITIVRAEDHFSDRSALPTYN HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC SHAVESQLHHIPGLSEHFLYSNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGANNPA CHHHHHHHHHCCCCHHHCEECCCCEEECCCCCCEEEECCCCCEEEEEHHHHCCCCCCCCC RSGFENAARVNRQLLFDRFGQVITRHLEHTAVPLRKSVLIEMEREFPEEFARTAASPFRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DTDISVTNSFYHYYALMTGRAVPQEKAKVLYVDTTSYAGLRLLPKLRKHRGYDFFCLNDG CCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCC SFPEVPAAQRAERVVSFLERYFPIPAPWEKIAADVSRRDFAVPRTSAPSEGA CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972