| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is merA [H]
Identifier: 121636720
GI number: 121636720
Start: 919518
End: 920417
Strand: Reverse
Name: merA [H]
Synonym: BCG_0848c
Alternate gene names: 121636720
Gene position: 920417-919518 (Counterclockwise)
Preceding gene: 121636722
Following gene: 121636719
Centisome position: 21.04
GC content: 68.78
Gene sequence:
>900_bases ATGACCGCGGCCCAACAGGACCAGGCGCCAATGGCAACACCCGGCTGCCGTGAGGGTGAAACGTATGACGTCGTCGTGCT CGGCGCGGGACCCGTTGGACAGAACGTCGCCGATCGTGCCCGCGCGGGGGGCCTGCGTGTCGCGGTGGTGGAGCGCGAAC TCGTCGGGGGTGAATGCTCCTATTGGGCCTGTGTGCCCAGCAAAGCCTTGCTGCGTCCGGTCATCGCGATCTCTGACGCC CGACGGGTCGACGGCGCGCGCGAAGCAGTCGACGGCTCGATCAACACAGCCGGCGTCTTTGGCCGCCGCAACCGCTATGT GGCCCACTGGGACGACACCGGCCAGGCCGACTGGGTGAGTGGAATCGGCGCGACGCTGATACGCGGTGACGGGCGATTGG ACGGTCCGCGCCGCGTCGTCGTCACCAAGTCGAGCGGCGAAAGCGTGGCGCTGACCGCCCGGCATGCCGTTGTCATCTGC ACCGGAAGCCGGCCAGCACTCCCCGACCTTCCTGGCATCACCGAAGCCCGGCCATGGACCAATCGCCAAGCCACCGACAA CAGTACGGTCCCCGACCGGCTTGCGATCGTCGGCGCCGGCGGCGTCGGTGTGGAGATGGCGACCGCCTGGCAGGGACTGG GCGCCTCGGTGACCCTGCTGGCTCGGGGATCTGGCCTGCTGCCCCGAATGGAACCGTTTGTGGGGGAACTCATCGGTCGC GGACTGGCCGACGCCGGCGTTGACGTGCGCGTGGGAGTATCGGTACGCGCGCTGGGCCGCCCCAACCCACTGGCCCAGTG GTCCTCGAGCTGGACGACGGTACCGAGCTGCGGGTCGACGAGGTACTCTTCGCCACCGGCCGAGCACCGCGAACCGACGA CATCGGCTTGGAGACAATAG
Upstream 100 bases:
>100_bases TCGAGAGCTTTTGCGTCTGGTGGGCGATAGGCCGGCACGGCTCACCGGCGCTAGGCGCGCGTAGCGTCGCTGGCAGAGTC CGACGAAAGGATCTTTGATT
Downstream 100 bases:
>100_bases GACTGACGCCGGGCAGCTGGCTGGACGTCGATGACACCTGCCGAGTGCGGGCTGTTGACGACGGCTGGCTCTATGCCGCC GGCGACGTCAACCATCGCGC
Product: putative oxidoreductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTAAQQDQAPMATPGCREGETYDVVVLGAGPVGQNVADRARAGGLRVAVVERELVGGECSYWACVPSKALLRPVIAISDA RRVDGAREAVDGSINTAGVFGRRNRYVAHWDDTGQADWVSGIGATLIRGDGRLDGPRRVVVTKSSGESVALTARHAVVIC TGSRPALPDLPGITEARPWTNRQATDNSTVPDRLAIVGAGGVGVEMATAWQGLGASVTLLARGSGLLPRMEPFVGELIGR GLADAGVDVRVGVSVRALGRPNPLAQWSSSWTTVPSCGSTRYSSPPAEHREPTTSAWRQ
Sequences:
>Translated_299_residues MTAAQQDQAPMATPGCREGETYDVVVLGAGPVGQNVADRARAGGLRVAVVERELVGGECSYWACVPSKALLRPVIAISDA RRVDGAREAVDGSINTAGVFGRRNRYVAHWDDTGQADWVSGIGATLIRGDGRLDGPRRVVVTKSSGESVALTARHAVVIC TGSRPALPDLPGITEARPWTNRQATDNSTVPDRLAIVGAGGVGVEMATAWQGLGASVTLLARGSGLLPRMEPFVGELIGR GLADAGVDVRVGVSVRALGRPNPLAQWSSSWTTVPSCGSTRYSSPPAEHREPTTSAWRQ >Mature_298_residues TAAQQDQAPMATPGCREGETYDVVVLGAGPVGQNVADRARAGGLRVAVVERELVGGECSYWACVPSKALLRPVIAISDAR RVDGAREAVDGSINTAGVFGRRNRYVAHWDDTGQADWVSGIGATLIRGDGRLDGPRRVVVTKSSGESVALTARHAVVICT GSRPALPDLPGITEARPWTNRQATDNSTVPDRLAIVGAGGVGVEMATAWQGLGASVTLLARGSGLLPRMEPFVGELIGRG LADAGVDVRVGVSVRALGRPNPLAQWSSSWTTVPSCGSTRYSSPPAEHREPTTSAWRQ
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=202, Percent_Identity=30.6930693069307, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI50301238, Length=244, Percent_Identity=27.0491803278689, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786307, Length=217, Percent_Identity=30.8755760368664, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87082354, Length=240, Percent_Identity=27.5, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789915, Length=204, Percent_Identity=28.921568627451, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI87081717, Length=260, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32565766, Length=201, Percent_Identity=30.3482587064677, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21358499, Length=249, Percent_Identity=28.5140562248996, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 31296; Mature: 31164
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAQQDQAPMATPGCREGETYDVVVLGAGPVGQNVADRARAGGLRVAVVERELVGGECS CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCEEEEEEEHHHCCCCCC YWACVPSKALLRPVIAISDARRVDGAREAVDGSINTAGVFGRRNRYVAHWDDTGQADWVS EEEECCCHHHHHHHHHHCCCHHCCCHHHHHCCCCCCEEECCCCCCEEEECCCCCCCHHHH GIGATLIRGDGRLDGPRRVVVTKSSGESVALTARHAVVICTGSRPALPDLPGITEARPWT CCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCC NRQATDNSTVPDRLAIVGAGGVGVEMATAWQGLGASVTLLARGSGLLPRMEPFVGELIGR CCCCCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHC GLADAGVDVRVGVSVRALGRPNPLAQWSSSWTTVPSCGSTRYSSPPAEHREPTTSAWRQ CCHHCCCEEEECEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCC >Mature Secondary Structure TAAQQDQAPMATPGCREGETYDVVVLGAGPVGQNVADRARAGGLRVAVVERELVGGECS CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCEEEEEEEHHHCCCCCC YWACVPSKALLRPVIAISDARRVDGAREAVDGSINTAGVFGRRNRYVAHWDDTGQADWVS EEEECCCHHHHHHHHHHCCCHHCCCHHHHHCCCCCCEEECCCCCCEEEECCCCCCCHHHH GIGATLIRGDGRLDGPRRVVVTKSSGESVALTARHAVVICTGSRPALPDLPGITEARPWT CCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCC NRQATDNSTVPDRLAIVGAGGVGVEMATAWQGLGASVTLLARGSGLLPRMEPFVGELIGR CCCCCCCCCCCCEEEEEECCCCCEEHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHC GLADAGVDVRVGVSVRALGRPNPLAQWSSSWTTVPSCGSTRYSSPPAEHREPTTSAWRQ CCHHCCCEEEECEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]