| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636556
Identifier: 121636556
GI number: 121636556
Start: 762806
End: 763282
Strand: Direct
Name: 121636556
Synonym: BCG_0684
Alternate gene names: NA
Gene position: 762806-763282 (Clockwise)
Preceding gene: 121636555
Following gene: 121636557
Centisome position: 17.44
GC content: 59.75
Gene sequence:
>477_bases GTGGCGTTGAGCGCAGACATCGTTGGGATGCATTACCGGTATCCCGACCACTACGAGGTGGAGCGGGAGAAGATTCGCGA GTACGCCGTCGCCGTTCAAAACGACGACGCGTGGTATTTCGAGGAGGACGGCGCCGCCGAACTCGGGTATAAGGGCTTGC TGGCTCCGTTGACGTTTATCTGTGTGTTCGGCTACAAGGCCCAGGCGGCGTTCTTCAAGCATGCGAACATCGCGACCGCG GAGGCGCAGATCGTCCAGGTAGACCAAGTGCTGAAATTCGAGAAACCGATCGTGGCGGGCGACAAGCTGTACTGCGACGT CTATGTGGATTCGGTGCGTGAGGCGCACGGCACCCAGATCATCGTGACCAAGAACATCGTCACCAACGAGGAAGGTGACC TCGTGCAGGAGACCTATACGACCCTGGCGGGCCGTGCCGGCGAGGATGGAGAGGGATTTTCTGATGGCGCTGCGTGA
Upstream 100 bases:
>100_bases AGTTCTGCCCGAATTGCGGCAAACACCAGGCGCACCGCGAGACGCGGTAACCGCCGACCCGCGAGCAGTTGCTGAGACTG ACTAGGTAGGTTCTACAGCC
Downstream 100 bases:
>100_bases GTTCAGCTCGGTGAAGGTCGGAGACCAGCTTCCGGAGAAGACCTACCCGCTGACCCGCCAGGATCTGGTGAACTACGCCG GAGTTTCGGGTGACTTGAAC
Product: (3R)-hydroxyacyl-ACP dehydratase subunit HadA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MALSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYKAQAAFFKHANIATA EAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTNEEGDLVQETYTTLAGRAGEDGEGFSDGAA
Sequences:
>Translated_158_residues MALSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYKAQAAFFKHANIATA EAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTNEEGDLVQETYTTLAGRAGEDGEGFSDGAA >Mature_157_residues ALSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFICVFGYKAQAAFFKHANIATAE AQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTNEEGDLVQETYTTLAGRAGEDGEGFSDGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y635_MYCTU (P96926)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: H70612 - RefSeq: NP_215149.1 - RefSeq: NP_335075.1 - ProteinModelPortal: P96926 - DIP: DIP-46457N - EnsemblBacteria: EBMYCT00000000700 - EnsemblBacteria: EBMYCT00000070349 - GeneID: 888032 - GeneID: 925946 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0664 - KEGG: mtu:Rv0635 - TIGR: MT0664 - TubercuList: Rv0635 - GeneTree: EBGT00050000015263 - HOGENOM: HBG659807 - OMA: FISVFGY - ProtClustDB: PRK13692 - GO: GO:0040007 - HAMAP: MF_00799 - InterPro: IPR016709 - PIRSF: PIRSF018072
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17481; Mature: 17349
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFI CCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCHHHHHHHHH CVFGYKAQAAFFKHANIATAEAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQI HHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCEEEEEEEHHHHHHCCCCEE IVTKNIVTNEEGDLVQETYTTLAGRAGEDGEGFSDGAA EEEECEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ALSADIVGMHYRYPDHYEVEREKIREYAVAVQNDDAWYFEEDGAAELGYKGLLAPLTFI CCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCHHHHHHHHH CVFGYKAQAAFFKHANIATAEAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQI HHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCEEEEEEEHHHHHHCCCCEE IVTKNIVTNEEGDLVQETYTTLAGRAGEDGEGFSDGAA EEEECEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036