| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is yrbE2A [C]
Identifier: 121636505
GI number: 121636505
Start: 716011
End: 716808
Strand: Direct
Name: yrbE2A [C]
Synonym: BCG_0632
Alternate gene names: 121636505
Gene position: 716011-716808 (Clockwise)
Preceding gene: 121636504
Following gene: 121636506
Centisome position: 16.37
GC content: 64.66
Gene sequence:
>798_bases ATGACCACCCACGCCGTGATCATCACCTATCTCCGCGACCAGACGCAGCCCGCCGTCGATGCGATCGGCGGGTTCTACCG GACATGCGTACTGACTGGCAAGGCGCTGGTTCGGCGGCCCTTCCATTGGCGTGAGGCGATCGAGCAGGGCTGGTTCATTA CCAGCGTCTCGTTGCTGCCAACCCTGGCGGTGTCGATTCCGTTGACCGTGTTGATCATCTTCACGCTCAATATCCTGCTG GCCGAGTTCGGCGCCGCCGACATCTCCGGCGCCGGCGCGGCGCTAGGCGCGGTCACCCAGCTGGGCCCGCTGACCACCGT GTTGGTGATTGCGGGCGCTGGAGCCACAGCGATCTGCGCCGACCTGGGTGCCCGCACCATCCGGGAAGAGATCGATGCGA TGGAGGTGCTGGGCATCGACCCCATCCACCGGCTGGTGGTGCCTCGGGTCGTTGCCGCGACCATCGTCGCCGCACTGCTC AACGGCGCGGTGATAACCATTGGCCTGGTTGGTGGTTTCGTCTTCAGTGTCTTCATCCAACACGTCTCGGCCGGCGCCTA CGTGGGCACGCTCACCTTGGTCACCGGTCTACCCGAGGTGATCATCTCGGTGGTCAAGTCGGCGACGTTCGGCCTGATCG CTGGCCTAGTCGGCTGTTACCGCGGGCTGACCACGAAAGGCGGCCCCAAGGGAGTTGGAACCGCCGTCAACGAAACCCTG GTGCTGTGCGTGATCGCGCTGTTCGCGACCAATGTGGTGTTGACCACGATCGGCGTGCGGTTCGGGACGGGACACTAG
Upstream 100 bases:
>100_bases GCTCAGGTGATCCCACCGGAGCGAAGAAAGCCGCCCAAGACCTACTCGAACTTGCGAACACATCGTTGATGGCCGTACTC GTTAGCCAGGCGAGTCGGCA
Downstream 100 bases:
>100_bases CATGGTGGAGTCTTCAACGGCATCAGCGGCAGCCGTATTGCGGGCCCGCTACCCACGCACAGCCGCCAGCCTTGACCGCT ACGGCGGCGGCACGGCCCGA
Product: integral membrane protein YrbE2a
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILL AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALL NGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL VLCVIALFATNVVLTTIGVRFGTGH
Sequences:
>Translated_265_residues MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILL AEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALL NGAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL VLCVIALFATNVVLTTIGVRFGTGH >Mature_264_residues TTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLPTLAVSIPLTVLIIFTLNILLA EFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICADLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLN GAVITIGLVGGFVFSVFIQHVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETLV LCVIALFATNVVLTTIGVRFGTGH
Specific function: Could be part of an ABC transporter complex [H]
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=181, Percent_Identity=24.3093922651934, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27328; Mature: 27197
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP CCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH VLCVIALFATNVVLTTIGVRFGTGH HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTHAVIITYLRDQTQPAVDAIGGFYRTCVLTGKALVRRPFHWREAIEQGWFITSVSLLP CCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHH TLAVSIPLTVLIIFTLNILLAEFGAADISGAGAALGAVTQLGPLTTVLVIAGAGATAICA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DLGARTIREEIDAMEVLGIDPIHRLVVPRVVAATIVAALLNGAVITIGLVGGFVFSVFIQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH HVSAGAYVGTLTLVTGLPEVIISVVKSATFGLIAGLVGCYRGLTTKGGPKGVGTAVNETL HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH VLCVIALFATNVVLTTIGVRFGTGH HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]