| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636414
Identifier: 121636414
GI number: 121636414
Start: 618175
End: 619107
Strand: Direct
Name: 121636414
Synonym: BCG_0539
Alternate gene names: NA
Gene position: 618175-619107 (Clockwise)
Preceding gene: 121636413
Following gene: 121636415
Centisome position: 14.13
GC content: 68.92
Gene sequence:
>933_bases ATGACGGGACCACACCCCGAAACAGAGAGCTCCGGTAACCGGCAGATCTCGGTGGCCGAGTTGCTGGCCAGGCAAGGGGT CACCGGCGCCCCGGCCCGACGGCGCCGGCGGCGACGCGGCGATAGTGACGCCATCACGGTCGCCGAGCTGACCGGTGAGA TTCCGATCATTCGTGACGACCATCACCACGCCGGCCCGGACGCGCACGCGAGCCAGTCTCCGGCGGCTAACGGGCGAGTC CAGGTTGGCGAAGCTGCCCCACAGTCGCCGGCGGAACCAGTCGCCGAGCAGGTTGCCGAAGAGCCAACGAGAACCGTGTA CTGGTCGCAACCCGAGCCGCGCTGGCCCAAGTCCCCCCCGCAGGACCGGCGCGAGTCCGGGCCCGAGCTTAGCGAGTACC CGCGGCCACTGCGCCACACGCATAGCGACAGAGCACCCGCGGGGCCGCCGTCCGGTGCCGAACACATGAGTCCGGATCCG GTCGAGCACTACCCCGATCTCTGGGTGGATGTCCTGGACACCGAGGTGGGCGAAGCGGAAGCCGAGACCGAGGTGCGCGA AGCGCAACCTGGGCGCGGCGAGCGCCACGCCGCAGCGGCTGCGGCCGGCACCGACGTCGAGGGTGATGGTGCGGCCGAGG CGCGGGTTGCCCGTCGTGCCCTGGACGTGGTCCCGACGCTGTGGCGCGGCGCGTTGGTCGTGCTGCAGTCGATCCTGGCC GTTGCCTTCGGTGCCGGGTTGTTCATCGCCTTCGACCAGTTGTGGCGCTGGAACAGCATAGTGGCGCTAGTGCTATCGGT GATGGTCATCCTTGGCCTAGTGGTCTCGGTGCGGGCAGTCCGCAAGACCGAAGACATCGCCAGTACGTTGATCGCGGTTG CGGTGGGGGCGCTGATTACCCTGGGACCGCTGGCCTTGTTGCAATCGGGCTAG
Upstream 100 bases:
>100_bases CCGCCCTCATCGAGTCTTCGTCTGTGCACACTTCGGTGCGTGCCGTCGGAGGTCAGCCAGCTGATCGGAACGCGGCCAAC CGATCGAGAGGCAGCAAACC
Downstream 100 bases:
>100_bases CCGCCACCACACACAGTGCGCCCAGCAATCAAAGTCGGCTTGTCGACGGCCTCGGTGTACCCGTTGCGGGCCGAGGCCGC GTTCGAGTACGCCGACAGGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTGPHPETESSGNRQISVAELLARQGVTGAPARRRRRRRGDSDAITVAELTGEIPIIRDDHHHAGPDAHASQSPAANGRV QVGEAAPQSPAEPVAEQVAEEPTRTVYWSQPEPRWPKSPPQDRRESGPELSEYPRPLRHTHSDRAPAGPPSGAEHMSPDP VEHYPDLWVDVLDTEVGEAEAETEVREAQPGRGERHAAAAAAGTDVEGDGAAEARVARRALDVVPTLWRGALVVLQSILA VAFGAGLFIAFDQLWRWNSIVALVLSVMVILGLVVSVRAVRKTEDIASTLIAVAVGALITLGPLALLQSG
Sequences:
>Translated_310_residues MTGPHPETESSGNRQISVAELLARQGVTGAPARRRRRRRGDSDAITVAELTGEIPIIRDDHHHAGPDAHASQSPAANGRV QVGEAAPQSPAEPVAEQVAEEPTRTVYWSQPEPRWPKSPPQDRRESGPELSEYPRPLRHTHSDRAPAGPPSGAEHMSPDP VEHYPDLWVDVLDTEVGEAEAETEVREAQPGRGERHAAAAAAGTDVEGDGAAEARVARRALDVVPTLWRGALVVLQSILA VAFGAGLFIAFDQLWRWNSIVALVLSVMVILGLVVSVRAVRKTEDIASTLIAVAVGALITLGPLALLQSG >Mature_309_residues TGPHPETESSGNRQISVAELLARQGVTGAPARRRRRRRGDSDAITVAELTGEIPIIRDDHHHAGPDAHASQSPAANGRVQ VGEAAPQSPAEPVAEQVAEEPTRTVYWSQPEPRWPKSPPQDRRESGPELSEYPRPLRHTHSDRAPAGPPSGAEHMSPDPV EHYPDLWVDVLDTEVGEAEAETEVREAQPGRGERHAAAAAAGTDVEGDGAAEARVARRALDVVPTLWRGALVVLQSILAV AFGAGLFIAFDQLWRWNSIVALVLSVMVILGLVVSVRAVRKTEDIASTLIAVAVGALITLGPLALLQSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML2433
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y497_MYCTU (P64715)
Other databases:
- EMBL: BX842573 - EMBL: AE000516 - PIR: D70745 - RefSeq: NP_215011.1 - RefSeq: NP_334926.1 - EnsemblBacteria: EBMYCT00000000228 - EnsemblBacteria: EBMYCT00000071752 - GeneID: 887240 - GeneID: 923893 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0517 - KEGG: mtu:Rv0497 - TIGR: MT0517 - TubercuList: Rv0497 - GeneTree: EBGT00050000014853 - HOGENOM: HBG569847 - OMA: YWSEPEP - ProtClustDB: CLSK790558
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33092; Mature: 32961
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x13116ce8)-; HASH(0x14063dc0)-; HASH(0x1321ce6c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPHPETESSGNRQISVAELLARQGVTGAPARRRRRRRGDSDAITVAELTGEIPIIRDD CCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEHHHHCCCCCEEECC HHHAGPDAHASQSPAANGRVQVGEAAPQSPAEPVAEQVAEEPTRTVYWSQPEPRWPKSPP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCC QDRRESGPELSEYPRPLRHTHSDRAPAGPPSGAEHMSPDPVEHYPDLWVDVLDTEVGEAE HHHHHCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH AETEVREAQPGRGERHAAAAAAGTDVEGDGAAEARVARRALDVVPTLWRGALVVLQSILA HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFGAGLFIAFDQLWRWNSIVALVLSVMVILGLVVSVRAVRKTEDIASTLIAVAVGALIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPLALLQSG HHHHHHHCCH >Mature Secondary Structure TGPHPETESSGNRQISVAELLARQGVTGAPARRRRRRRGDSDAITVAELTGEIPIIRDD CCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEHHHHCCCCCEEECC HHHAGPDAHASQSPAANGRVQVGEAAPQSPAEPVAEQVAEEPTRTVYWSQPEPRWPKSPP CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCC QDRRESGPELSEYPRPLRHTHSDRAPAGPPSGAEHMSPDPVEHYPDLWVDVLDTEVGEAE HHHHHCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH AETEVREAQPGRGERHAAAAAAGTDVEGDGAAEARVARRALDVVPTLWRGALVVLQSILA HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAFGAGLFIAFDQLWRWNSIVALVLSVMVILGLVVSVRAVRKTEDIASTLIAVAVGALIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGPLALLQSG HHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036