| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636381
Identifier: 121636381
GI number: 121636381
Start: 587273
End: 588067
Strand: Direct
Name: 121636381
Synonym: BCG_0506
Alternate gene names: NA
Gene position: 587273-588067 (Clockwise)
Preceding gene: 121636378
Following gene: 121636382
Centisome position: 13.42
GC content: 63.65
Gene sequence:
>795_bases GTGAGCCTCGACAAAAAATTGATGCCCGTGCCCGACGGTCACCCCGACGTGTTCGACCGAGAATGGCCGCTGCGCGTCGG CGACATCGACCGCGCGGGCCGGCTGCGGCTGGACGCGGCTTGTCGGCACATCCAGGACATCGGTCAGGACCAACTGCGCG AGATGGGCTTCGAGGAGACCCACCCGCTGTGGATCGTCCGCAGGACCATGGTGGACCTTATCCGGCCGATCGAGTTCGGC GACATGCTGCGGTGTCGGCGCTGGTGCTCGGGCACCTCCAACCGGTGGTGTGAGATGCGAGTTCGTGTCGATGGCCGCAA GGGCGGCCTGATCGAATCCGAGGCGTTCTGGATCCACGTCAACCGGGAAACCGAGATGCCGGCCCGCATTGCCGACGACT TCCTCGCGGGTCTGCACCGGACCACGTCTGTTGATCGGCTGCGCTGGAAGGGCTATCTGAAGCCGGGCAGCCGGGATGAT GCGTCGGAGATCCACGAGTTCCCGGTCCGGGTCACCGATATCGACTTGTTCGACCACATGAACAACGCTGTCTATTGGAG TGTGATCGAGGACTACCTGGCGTCGCATGCAGAGCTGCTGCGGGGCCCTTTGCGGGTGACCATCGAGCATGAGGCGCCGG TTGCGCTCGGCGACAAGCTGGAGATCATCTCCCACGTTCACCCGGCTGGTTCGACCGAGATATTCGGCCCGGGGTTGGTC GACCGCGCTGTTACAACGCTCACATATGTGGTTGGCGACGAGCCCAAGGCAGTCGCCTCGCTGTTCAATCTGTGA
Upstream 100 bases:
>100_bases CGTGCTGCGATTGGTGTTTCCGCCACGGCGTTGGCATGATTCGCACCGGGACTCAAGGGTGAGCCTGAGGTACACGCGAG GAGGAAATGGGGAGAACGCC
Downstream 100 bases:
>100_bases CCGGATCCGCAGGACGTCGATCCGTGGGTTTACCTGCGGATTTGTCATTACTGGCGGGTAGCTTCTGAAACGGTTCAGTT TTTGGGCGACTTCGCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSLDKKLMPVPDGHPDVFDREWPLRVGDIDRAGRLRLDAACRHIQDIGQDQLREMGFEETHPLWIVRRTMVDLIRPIEFG DMLRCRRWCSGTSNRWCEMRVRVDGRKGGLIESEAFWIHVNRETEMPARIADDFLAGLHRTTSVDRLRWKGYLKPGSRDD ASEIHEFPVRVTDIDLFDHMNNAVYWSVIEDYLASHAELLRGPLRVTIEHEAPVALGDKLEIISHVHPAGSTEIFGPGLV DRAVTTLTYVVGDEPKAVASLFNL
Sequences:
>Translated_264_residues MSLDKKLMPVPDGHPDVFDREWPLRVGDIDRAGRLRLDAACRHIQDIGQDQLREMGFEETHPLWIVRRTMVDLIRPIEFG DMLRCRRWCSGTSNRWCEMRVRVDGRKGGLIESEAFWIHVNRETEMPARIADDFLAGLHRTTSVDRLRWKGYLKPGSRDD ASEIHEFPVRVTDIDLFDHMNNAVYWSVIEDYLASHAELLRGPLRVTIEHEAPVALGDKLEIISHVHPAGSTEIFGPGLV DRAVTTLTYVVGDEPKAVASLFNL >Mature_263_residues SLDKKLMPVPDGHPDVFDREWPLRVGDIDRAGRLRLDAACRHIQDIGQDQLREMGFEETHPLWIVRRTMVDLIRPIEFGD MLRCRRWCSGTSNRWCEMRVRVDGRKGGLIESEAFWIHVNRETEMPARIADDFLAGLHRTTSVDRLRWKGYLKPGSRDDA SEIHEFPVRVTDIDLFDHMNNAVYWSVIEDYLASHAELLRGPLRVTIEHEAPVALGDKLEIISHVHPAGSTEIFGPGLVD RAVTTLTYVVGDEPKAVASLFNL
Specific function: Unknown
COG id: COG3884
COG function: function code I; Acyl-ACP thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002864 [H]
Pfam domain/function: PF01643 Acyl-ACP_TE [H]
EC number: NA
Molecular weight: Translated: 30186; Mature: 30055
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDKKLMPVPDGHPDVFDREWPLRVGDIDRAGRLRLDAACRHIQDIGQDQLREMGFEET CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCCHHHHHHCCCCCC HPLWIVRRTMVDLIRPIEFGDMLRCRRWCSGTSNRWCEMRVRVDGRKGGLIESEAFWIHV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCEEEEEE NRETEMPARIADDFLAGLHRTTSVDRLRWKGYLKPGSRDDASEIHEFPVRVTDIDLFDHM CCCCCCCHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCHHHHHHCCCEEEEEHHHHHC NNAVYWSVIEDYLASHAELLRGPLRVTIEHEAPVALGDKLEIISHVHPAGSTEIFGPGLV CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHH DRAVTTLTYVVGDEPKAVASLFNL HHHHHHHHEEECCCHHHHHHHHCC >Mature Secondary Structure SLDKKLMPVPDGHPDVFDREWPLRVGDIDRAGRLRLDAACRHIQDIGQDQLREMGFEET CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCCHHHHHHCCCCCC HPLWIVRRTMVDLIRPIEFGDMLRCRRWCSGTSNRWCEMRVRVDGRKGGLIESEAFWIHV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEECCEEEEEE NRETEMPARIADDFLAGLHRTTSVDRLRWKGYLKPGSRDDASEIHEFPVRVTDIDLFDHM CCCCCCCHHHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCHHHHHHCCCEEEEEHHHHHC NNAVYWSVIEDYLASHAELLRGPLRVTIEHEAPVALGDKLEIISHVHPAGSTEIFGPGLV CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHH DRAVTTLTYVVGDEPKAVASLFNL HHHHHHHHEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]