| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is lpqL [H]
Identifier: 121636332
GI number: 121636332
Start: 534311
End: 535813
Strand: Direct
Name: lpqL [H]
Synonym: BCG_0457
Alternate gene names: 121636332
Gene position: 534311-535813 (Clockwise)
Preceding gene: 121636331
Following gene: 121636333
Centisome position: 12.21
GC content: 64.67
Gene sequence:
>1503_bases ATGGTGAACAAATCCAGGATGATGCCGGCGGTGCTGGCCGTGGCTGTGGTCGTCGCATTCCTGACGACGGGCTGTATCCG GTGGTCTACGCAGTCGCGGCCCGTTGTTAACGGCCCCGCTGCCGCAGAGTTCGCCGTTGCGTTGCGCAACCGGGTGAGCA CCGACGCGATGATGGCGCACCTATCGAAACTGCAGGACATCGCCAACGCCAACGACGGCACTCGCGCGGTGGGCACCCCT GGCTATCAGGCCAGCGTCGACTATGTGGTAAACACACTGCGCAACAGCGGTTTTGATGTGCAAACCCCGGAGTTCTCCGC TCGCGTGTTCAAGGCCGAAAAAGGGGTGGTGACCCTCGGCGGCAACACCGTGGAGGCGAGGGCGCTCGAGTACAGCCTCG GCACACCGCCGGACGGGGTGACGGGCCCGCTGGTGGCTGCCCCCGCCGACGACAGTCCGGGCTGCAGTCCGTCGGACTAC GACAGGCTGCCGGTGTCCGGTGCGGTGGTGCTGGTAGATCGCGGCGTCTGTCCTTTTGCCCAGAAGGAAGACGCAGCCGC GCAGCGCGGTGCGGTGGCGCTGATCATTGCTGACAACATCGACGAGCAGGCGATGGGCGGCACCCTGGGGGCTAATACCG ACGTCAAGATCCCGGTGGTGAGTGTCACCAAGTCGGTCGGATTCCAGCTACGCGGACAGTCTGGGCCAACCACCGTCAAG CTCACGGCGAGCACCCAAAGTTTCAAGGCCCGCAACGTCATCGCGCAGACGAAGACGGGGTCGTCGGCCAACGTGGTGAT GGCAGGTGCGCATTTGGACAGCGTTCCGGAAGGACCCGGCATCAACGACAACGGCTCGGGAGTGGCTGCGGTTCTGGAAA CGGCAGTGCAGCTGGGGAACTCACCGCATGTGTCCAACGCGGTACGGTTCGCCTTCTGGGGCGCCGAGGAATTCGGCCTG ATTGGGTCACGAAACTACGTCGAGTCGCTGGACATCGACGCGCTCAAAGGCATCGCGCTGTATCTGAACTTCGACATGTT GGCGTCGCCGAACCCGGGTTACTTCACCTACGACGGTGACCAGTCGCTGCCGCTAGACGCCCGCGGTCAGCCGGTGGTGC CCGAAGGCTCGGCCGGTATCGAGCGCACGTTCGTCGCCTATCTGAAGATGGCCGGCAAGACCGCGCAGGACACCTCGTTC GACGGTCGGTCCGACTACGACGGCTTCACGCTGGCGGGTATCCCTTCGGGTGGCCTGTTCTCCGGCGCTGAGGTCAAGAA GTCCGCCGAGCAAGCCGAGCTCTGGGGCGGCACCGCCGACGAGCCTTTCGATCCCAACTATCACCAGAAGACAGACACCC TGGACCATATCGACCGCACCGCGCTCGGTATCAACGGCGCTGGCGTCGCGTACGCGGTGGGTTTGTATGCGCAGGACCTC GGCGGCCCCAACGGGGTTCCGGTCATGGCGGACCGCACCCGCCACCTGATTGCCAAACCGTGA
Upstream 100 bases:
>100_bases TGTGTAACCTCCGGTTTAGGCCATTCAACGCTCTGTTCGTTTGATTGGTCGGTGGGATGCGAAAGCTGCGCGGCGACAGG CGCGGTCTAATCTGGGCGCG
Downstream 100 bases:
>100_bases TCCGGGCCTGATCTCGCCACTGACCCCGCACCGACCGATCTAGAATGGGATTTCCTTGGTGCATGCCGGGCGGGACGGGG TTAGGAGATGCATGGTCGCG
Product: putative lipoprotein aminopeptidase lpqL
Products: NA
Alternate protein names: LIE1 [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTP GYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDY DRLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVK LTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSPHVSNAVRFAFWGAEEFGL IGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSF DGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDL GGPNGVPVMADRTRHLIAKP
Sequences:
>Translated_500_residues MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTP GYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDY DRLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVK LTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSPHVSNAVRFAFWGAEEFGL IGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSF DGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDL GGPNGVPVMADRTRHLIAKP >Mature_500_residues MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTP GYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDY DRLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVK LTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSPHVSNAVRFAFWGAEEFGL IGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSF DGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDL GGPNGVPVMADRTRHLIAKP
Specific function: A leucine-specific metalloprotease that plays a role in controlling the amount of leupeptin during colony development. Degrades leupeptin into three components, acetyl-leucine, leucine and argininal [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28A subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319763, Length=458, Percent_Identity=31.6593886462882, Blast_Score=206, Evalue=8e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR007484 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF04389 Peptidase_M28 [H]
EC number: NA
Molecular weight: Translated: 52043; Mature: 52043
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAH CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH LSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLG HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEC GNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYDRLPVSGAVVLVDRGVCPFA CCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC QKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVK CCCHHHHHCCCEEEEEECCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCEEEE LTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGN EEECCCCHHHHHHEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC SPHVSNAVRFAFWGAEEFGLIGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGD CCCCCCEEEEEEECCHHHCCCCCCCHHHHCCHHHHCCEEEEEEEEEECCCCCCEEEECCC QSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSFDGRSDYDGFTLAGIPSGGLF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC SGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC GGPNGVPVMADRTRHLIAKP CCCCCCCEEECCCCHHCCCC >Mature Secondary Structure MVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAH CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH LSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLG HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEC GNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYDRLPVSGAVVLVDRGVCPFA CCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC QKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVK CCCHHHHHCCCEEEEEECCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCEEEE LTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGN EEECCCCHHHHHHEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC SPHVSNAVRFAFWGAEEFGLIGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGD CCCCCCEEEEEEECCHHHCCCCCCCHHHHCCHHHHCCEEEEEEEEEECCCCCCEEEECCC QSLPLDARGQPVVPEGSAGIERTFVAYLKMAGKTAQDTSFDGRSDYDGFTLAGIPSGGLF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCC SGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHC GGPNGVPVMADRTRHLIAKP CCCCCCCEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA