| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636281
Identifier: 121636281
GI number: 121636281
Start: 476127
End: 477338
Strand: Reverse
Name: 121636281
Synonym: BCG_0406c
Alternate gene names: NA
Gene position: 477338-476127 (Counterclockwise)
Preceding gene: 121636282
Following gene: 121636280
Centisome position: 10.91
GC content: 70.05
Gene sequence:
>1212_bases ATGGCCACCCCTGCACTGTTGCCGGGCGTCGACCTCGCGGCGTTCGCGGCAGCGCTGGCAGCGCGCCTTCGCGACGCCGG GATACCGGTGTCCGCCAGCGGTCAAGCGAGTTTGGTGCAGGCGTTGCAGCAGTTGGTGCCGCGTACGCCGGCGGCGCTGT ATTGGGGCGCGCGGTTGACCCTGGTCAGCCGTGTAGACGAACTGGCCACGTTCGATGCGGTATTCGCTTCGCTGTTCGGG GTATTTGGCAGCGCCGAACCCGACGGTGCCAACCGCCCACCACCGCCCATTGCAGGCCCGCGCACACCGGTGGCCGGCGT CGGGCACCGCGCCAAGCGGCGATCTTGTGCCGCCCAAGCCCAGAATCTGCCCTGGGATACTCGCTCGCTGACGATGGCCA GCGCCGGTCAGGGCGGACCCAGCCGCACACTGCCCGATGTCCTGCCCAGCCGCATTGTCGCCCGGGCCGACGAGCCATTC GACCAGTTCGATCCCGACGATCTGCGTCTGCTCGGCGCCTGGCTGGAGGCCACGATGGCGCGCTGGCCGCGGCGGCGCAG CATGCGATTCGAGTCCAGCCCGCACGGCAAGCGCATCGACCTGCGGGCGACGATGAACGCGTCGCGGTCGACTGGCTGGG AGTCGGTGCTGTTGGCACGGATCCGGCCCCGCCGACGCCCCAGGCGGGTGCTCCTGCTCTGCGATGTGAGCCGCTCGATG CAGCCCTACGCCGCCATCTATCTGCATCTGATGCGGGCGGCGGTGCTGCGCCGGGCAGGGGGCCACCCGGAGGTTTTCGC GTTTTCGACGTCGCTGACTCGACTTACCTCGGTGCTGTCTCATCGCTCGGCCGAGATGGCGCTACATCGGGCCAACGCTA GGGTGACCGACCGCTACGGCGGTACGTTCATCGGCCGTAGTGTCGCCGCCCTGCTGGCCCCGCCGCATGGCAACGCGTTA CGCGGCGCGGTGGTGATCATCGCCTCCGACGGCTGGGACAGCGATCCGCCCGACGTGTTGGTGCACGCACTGACCAGGGT GCGTCGCCGCGCCGAGTTGCTGGTCTGGCTGAACCCTCGCGCGGCACATCCGGAGTTCCAGCCGCGTGCCGGTTCGATGG CGGCGGCGCTGCCCTATTGCGACCTGTTCCTGCCGGCGCACTCGCTGGCCGGCCTGCACCAGTTGCTGCTGGCGCTGGCC GGTGCCCGCTAG
Upstream 100 bases:
>100_bases TGGCCGACGGCGGCCAGCTCAAAAAGTACGGTTCGGCGCTGCTGGCGGCGCTGACCGTGCTGCTGCTGATCTGGGTGCTG CGCCGGCGGCGATGAATGGG
Downstream 100 bases:
>100_bases CCGTGTGCGCCCCTCACCACAGCTCGGTGTAGCACTTTGCTATAAGCTGTAACAGATCGCTACACCCGAGGAGAGATGTC GTGCCCAAAGCCGTCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; VWA Domain CoxE-Like Family Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein; CoxE Protein; Von Willebrand Factor Type A Domain-Containing Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLTLVSRVDELATFDAVFASLFG VFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPF DQFDPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNAL RGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALA GAR
Sequences:
>Translated_403_residues MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLTLVSRVDELATFDAVFASLFG VFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPF DQFDPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNAL RGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALA GAR >Mature_402_residues ATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLTLVSRVDELATFDAVFASLFGV FGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFD QFDPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSMQ PYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNALR GAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAG AR
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43538; Mature: 43407
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH LVSRVDELATFDAVFASLFGVFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFDQFDPDDLRLLGAWLEATMA HCCCCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM HCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYG CHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC GTFIGRSVAALLAPPHGNALRGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPR CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEEECCC AAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAGAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLT CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH LVSRVDELATFDAVFASLFGVFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFDQFDPDDLRLLGAWLEATMA HCCCCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH RWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM HCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYG CHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC GTFIGRSVAALLAPPHGNALRGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPR CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEEECCC AAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAGAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA