| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636188
Identifier: 121636188
GI number: 121636188
Start: 358964
End: 359689
Strand: Reverse
Name: 121636188
Synonym: BCG_0313c
Alternate gene names: NA
Gene position: 359689-358964 (Counterclockwise)
Preceding gene: 121636190
Following gene: 121636186
Centisome position: 8.22
GC content: 67.91
Gene sequence:
>726_bases ATGACGCGCAGTGATCGACCCTACCGCGGCGTCGAGGCCGCCGAGCGACTGGCGACGCGCCGTCGCCAGTTGCTCTCTGC CGGCCTGGACCTGTTGGGGTCCGACCAGCACGACATCGCCGAGCTAACCATCCGCACCATTTGCCGGCGGGCCGGCCTGT CGGTGCGCTACTTCTACGAAAGCTTCACCGACAAGGACGAATTCGTCGGCCGCGTGTTCGACTGGGTGGTGGCCGAGCTG GTCGCCACCACTCAGGCCGCGGTCACGGCGGTACCGGCGCGGGAGCAGACTCGCGCGGGCATGGCCAACATCGTGCGGAC CATCACCGCAGACGCCCGCGTCGGACGCCTGCTGTTCAGCACACAGCTGGCCAACGCAGTGATCACCCGCAAGCGTGCGG AATCCAGCGCCCTGTTCGCCATGCTGTCCGGCCAACATGCCGTCGACACCCTGCACGCACCGGCAAATGACCACGTCAAG GCGGTCGCACACTTCGCCGTCGGCGGCGTCGGGCAGACCATCAGCGCCTGGCTGGCCGGTGACGTGCGACTCGATCCCGA CCAGCTGGTCGATCAGCTAGCTGCGCTGCTCGATGAACTCACCGACCCAAACTTGTCCCGTCCCCGGGTAGCGGCAACAG CTGCCAAATCCGGGGCTAACGATCCGCAGCCACCGGAGGTCGCCGGTCAGCCGCCGTCTTCGGCACGGCCTGCGCGTCGC TCGTAG
Upstream 100 bases:
>100_bases GAAATCGCCATCCGAAGGCCTCCCGGCGCTGCCGCTAATTATGGAAACACCTGTATCCTGATATTGGCCGGTATCGTGCC CGAGTGTCAAGATGATCCGT
Downstream 100 bases:
>100_bases TGAATTCCTTTGTCCAGCAAGCGAATTCCAGAGTTATCCCATCGGGGTCCTGGAAGTAGAACGAGCGTACGTACACACCG GGATGCACCACCGCGGACAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; FadD27 Protein
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTRSDRPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAEL VATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVK AVAHFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARR S
Sequences:
>Translated_241_residues MTRSDRPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAEL VATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVK AVAHFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARR S >Mature_240_residues TRSDRPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYESFTDKDEFVGRVFDWVVAELV ATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFSTQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKA VAHFAVGGVGQTISAWLAGDVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25976; Mature: 25844
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSDRPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHH SFTDKDEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHC DVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARR CCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC S C >Mature Secondary Structure TRSDRPYRGVEAAERLATRRRQLLSAGLDLLGSDQHDIAELTIRTICRRAGLSVRYFYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHH SFTDKDEFVGRVFDWVVAELVATTQAAVTAVPAREQTRAGMANIVRTITADARVGRLLFS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLANAVITRKRAESSALFAMLSGQHAVDTLHAPANDHVKAVAHFAVGGVGQTISAWLAG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHC DVRLDPDQLVDQLAALLDELTDPNLSRPRVAATAAKSGANDPQPPEVAGQPPSSARPARR CCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA