| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is TB39.8
Identifier: 121635930
GI number: 121635930
Start: 53527
End: 55092
Strand: Reverse
Name: TB39.8
Synonym: BCG_0050c
Alternate gene names: NA
Gene position: 55092-53527 (Counterclockwise)
Preceding gene: 121635931
Following gene: 121635929
Centisome position: 1.26
GC content: 66.41
Gene sequence:
>1566_bases ATGGGTAGCCAGAAAAGGCTGGTTCAGCGCGTTGAGCGCAAACTCGAGCAGACGGTTGGCGATGCGTTTGCCCGCATCTT TGGAGGCTCGATCGTCCCGCAAGAGGTCGAAGCCCTGCTGCGCCGCGAGGCGGCCGACGGCATCCAGTCGCTGCAGGGAA ATCGCCTTTTGGCGCCCAACGAATACATCATTACCCTCGGTGTGCACGACTTTGAGAAGTTGGGCGCTGATCCTGAGCTG AAGTCAACCGGTTTTGCTCGGGACTTGGCGGACTATATCCAAGAACAGGGGTGGCAAACGTATGGTGATGTGGTCGTCCG ATTCGAGCAGTCGTCGAACCTGCATACCGGCCAGTTCCGCGCCCGCGGCACTGTTAACCCCGACGTTGAGACCCACCCGC CGGTCATCGATTGCGCCCGGCCACAATCAAACCACGCGTTTGGCGCAGAACCAGGAGTAGCACCAATGAGTGACAATTCG AGCTACCGTGGCGGTCAGGGGCAGGGGCGTCCCGACGAGTATTACGACGACCGCTATGCGCGTCCGCAAGAGGATCCGCG TGGTGGCCCGGATCCGCAAGGCGGATCTGACCCCCGCGGGGGGTATCCACCCGAGACGGGCGGCTACCCGCCCCAGCCGG GCTACCCACGCCCGCGCCACCCGGGCCAGGGCGACTACCCCGAGCAAATCGGGTACCCCGACCAGGGCGGTTACCCCGAG CAACGCGGCTACCCCGACCAGCGCGGGTACCAGGACCAGGGTCGAGGCTACCCCGACCAAGGGCAGGGGGGCTATCCGCC GCCCTACGAGCAACGCCCTCCTGTTTCTCCCGGCCCGGCTGCCGGCTACGGCGCTCCCGGCTACGACCAGGGCTATCGCC AAAGCGGCGGCTGCGGCCCTTCACCCGGTGGCGGCCAGCCCGGCTACGGCGGGTACGGGGAGTACGGGCGTGGCCCGGCT CGCCACGAGGAGGGCAGCTATGTGCCCTCTGGCCCTCCGGGCCCGCCCGAGCAACGACCGGCTTACCCCGACCAAGGCGG TTACGACCAGGGCTACCAGCAAGGCGCCACGACATACGGCCGGCAAGACTATGGCGGCGGCGCTGACTACACCCGCTACA CCGAATCCCCGCAGGTCCCGGGATACGCTCCTCAGGGTGGCGGGTACGCCGAACCCGCCGGCCGAGACTACGACTACGGC CAATCAGGCGCTCCGGACTACGGTCAGCCAGCGCCCGGTGGCTACAGCGGTTACGGGCAGGGCGGCTATGGGTCCGCCGG AACGTCGGTTACGCTGCAGCTCGACGACGGCAGCGGACGCACTTACCAGCTCCGCGAGGGCTCCAACATCATCGGTCGCG GACAGGACGCCCAGTTCCGGCTGCCCGACACCGGTGTGTCACGCCGTCACTTGGAGATCCGGTGGGACGGGCAGGTCGCA TTGCTCGCAGACCTGAACTCCACCAACGGCACCACTGTTAACAATGCACCGGTACAGGAGTGGCAGTTGGCCGACGGTGA TGTGATCCGCTTGGGACACTCCGAGATCATCGTCCGCATGCACTGA
Upstream 100 bases:
>100_bases CTCACACTGTCCCGATACCATGATTGATTGACACGACATACAGGCGAGTCGTTTGCCTTGCGCCGACGATGCACCAGAAC AGTGAGGCGAGCGCTGAAAG
Downstream 100 bases:
>100_bases ACCTACTGGGCTCGAAGCTGCCGGGGTTGACCCGCGCCGACCACCGTCAAAGTATCGTGACTTTGCTGACGTGCTCGGCA GCGCGGGGCCGGAGCAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; Xyppx Repeat-Containing Protein
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPEL KSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNS SYRGGQGQGRPDEYYDDRYARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGCGPSPGGGQPGYGGYGEYGRGPA RHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYG QSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVA LLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH
Sequences:
>Translated_521_residues MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPEL KSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNS SYRGGQGQGRPDEYYDDRYARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGCGPSPGGGQPGYGGYGEYGRGPA RHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYG QSGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVA LLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH >Mature_520_residues GSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLGVHDFEKLGADPELK STGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFRARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSS YRGGQGQGRPDEYYDDRYARPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPEQ RGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGCGPSPGGGQPGYGGYGEYGRGPAR HEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYGRQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYGQ SGAPDYGQPAPGGYSGYGQGGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVAL LADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56004; Mature: 55873
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR CEEEEECCHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEE ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA ECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCH QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGCGP HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC RQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVA CCCCCCCCEEEEEEECCCCCEEEECCCCCEEECCCCCEEECCCCCCCCEEEEEEECCCEE LLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH EEEECCCCCCCCCCCCCCCCEECCCCCEEEECCCEEEEEEC >Mature Secondary Structure GSQKRLVQRVERKLEQTVGDAFARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPN CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC EYIITLGVHDFEKLGADPELKSTGFARDLADYIQEQGWQTYGDVVVRFEQSSNLHTGQFR CEEEEECCHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEE ARGTVNPDVETHPPVIDCARPQSNHAFGAEPGVAPMSDNSSYRGGQGQGRPDEYYDDRYA ECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC RPQEDPRGGPDPQGGSDPRGGYPPETGGYPPQPGYPRPRHPGQGDYPEQIGYPDQGGYPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCH QRGYPDQRGYQDQGRGYPDQGQGGYPPPYEQRPPVSPGPAAGYGAPGYDQGYRQSGGCGP HCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPGGGQPGYGGYGEYGRGPARHEEGSYVPSGPPGPPEQRPAYPDQGGYDQGYQQGATTYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC RQDYGGGADYTRYTESPQVPGYAPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGYGSAGTSVTLQLDDGSGRTYQLREGSNIIGRGQDAQFRLPDTGVSRRHLEIRWDGQVA CCCCCCCCEEEEEEECCCCCEEEECCCCCEEECCCCCEEECCCCCCCCEEEEEEECCCEE LLADLNSTNGTTVNNAPVQEWQLADGDVIRLGHSEIIVRMH EEEECCCCCCCCCCCCCCCCEECCCCCEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA