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The map label for this gene is oxaA [H]

Identifier: 121635907

GI number: 121635907

Start: 27104

End: 28204

Strand: Reverse

Name: oxaA [H]

Synonym: BCG_0027c

Alternate gene names: 121635907

Gene position: 28204-27104 (Counterclockwise)

Preceding gene: 121635908

Following gene: 121635906

Centisome position: 0.64

GC content: 59.95

Gene sequence:

>1101_bases
GTGAGTCTTTTGTTTGATTTCTTCAGTCTCGACTTCATCTACTACCCGGTGTCGTGGATCATGTGGGTTTGGTACCGGCT
GTTCGCGTTTGTGCTAGGACCATCCAACTTCTTCGCCTGGGCGTTGTCGGTGATGTTCCTGGTCTTCACGCTGCGTGCGC
TGCTGTACAAGCCGTTCGTGCGCCAGATTCGCACCACCAGGCAGATGCAGGAACTGCAACCACAGATCAAGGCCTTGCAA
AAGAAATACGGCAAGGATCGTCAGCGGATGGCGCTCGAAATGCAAAAGCTGCAACGCGAGCACGGCTTCAACCCCATTCT
CGGATGTTTGCCGATGCTGGCGCAGATTCCGGTGTTTCTTGGGCTCTATCATGTGTTGCGCTCGTTTAACCGTACGACCG
GGGGCTTTGGTCAACCACACTTGTCGGTGATCGAGAACCGACTGACTGGGAACTACGTCTTTAGCCCGGTCGACGTCGGC
CACTTCCTAGATGCCAACTTGTTCGGCGCTCCGATCGGGGCGTACATGACGCAACGGTCCGGGTTGGATGTGTTCGTCGA
TTTCAGTCGCCCTGCGTTGATCGCGGTGGGTGTGCCGGTGATGATCTTGGCCGGCATCGCGACGTACTTCAACAGTCGCG
CGTCTATCGCGCGGCAGAGCGCCGAGGCGGCTGCGAATCCACAGACCGCGATGATGAACAAGCTGGCGCTGTACGTATTT
CCGCTCGGCGTAGTCGTCGGCGGACCGTTCCTGCCACTGGCGATCATCTTGTATTGGTTCTCGAACAATATCTGGACGTT
CGGGCAGCAGCATTACGTCTTCGGCATGATCGAAAAGGAGGAGGAGGCCAAAAAGCAGGAGGCGGTCCGGCGCCGGGCGG
CCAACGCGCCGGCCCCGGGAGCTAAGCCCAAGCGGAGCCCGAAGACCGCTCCAGCGACCAATGCGGCAGCCCCAACAGAA
GCCGGGGACACCGATGACGGGGCAGAGTCGGACGCCAGCACTGAGCGACCAGCCGACACGTCCAATCCGGCCAGACGCAA
CAGCGGCCCGAGCGCCCGTACGCCGCGGCCCGGGGTGCGACCGAAAAAACGCAAACGTTGA

Upstream 100 bases:

>100_bases
TGGGATCCGATACCGGAAGGCTTAACGACAGGCCGGAGCTGCCAGACAGACGTCGACGGCGCGAACGACGACTGGAACCC
TGCGTCAAAGCGAGGGGAGC

Downstream 100 bases:

>100_bases
CAATCCTTCCGGGCAGCCGGGCAGGCGGTCCCACAAACACAACCCACCCGCAGACGAGGGGAGAGCAAGCCATGGCCGAC
GCTGACACCACCGACTTCGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQ
KKYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVG
HFLDANLFGAPIGAYMTQRSGLDVFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVF
PLGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFGMIEKEEEAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPTE
AGDTDDGAESDASTERPADTSNPARRNSGPSARTPRPGVRPKKRKR

Sequences:

>Translated_366_residues
MSLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQ
KKYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVG
HFLDANLFGAPIGAYMTQRSGLDVFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVF
PLGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFGMIEKEEEAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPTE
AGDTDDGAESDASTERPADTSNPARRNSGPSARTPRPGVRPKKRKR
>Mature_365_residues
SLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQK
KYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGH
FLDANLFGAPIGAYMTQRSGLDVFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVFP
LGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFGMIEKEEEAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPTEA
GDTDDGAESDASTERPADTSNPARRNSGPSARTPRPGVRPKKRKR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=109, Percent_Identity=33.9449541284404, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 40945; Mature: 40814

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
SLLFDFFSLDFIYYPVSWIMWVWYRLFAFVLGPSNFFAWALSVMFLVFTLRALLYKPFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RQIRTTRQMQELQPQIKALQKKYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GLYHVLRSFNRTTGGFGQPHLSVIENRLTGNYVFSPVDVGHFLDANLFGAPIGAYMTQRS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHCCHHHCCCHHHHHHHCC
GLDVFVDFSRPALIAVGVPVMILAGIATYFNSRASIARQSAEAAANPQTAMMNKLALYVF
CCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PLGVVVGGPFLPLAIILYWFSNNIWTFGQQHYVFGMIEKEEEAKKQEAVRRRAANAPAPG
HHHHHHCCHHHHHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
AKPKRSPKTAPATNAAAPTEAGDTDDGAESDASTERPADTSNPARRNSGPSARTPRPGVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKKRKR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]