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The map label for this gene is 120613396

Identifier: 120613396

GI number: 120613396

Start: 5319760

End: 5322594

Strand: Direct

Name: 120613396

Synonym: Aave_4769

Alternate gene names: NA

Gene position: 5319760-5322594 (Clockwise)

Preceding gene: 120613395

Following gene: 120613397

Centisome position: 99.38

GC content: 71.78

Gene sequence:

>2835_bases
ATGTTCCACCTGCAAACCCTCGAACTCGTCCACTGGGACTACTGCCAGCGCGTCGCGCTGCCGCTGGACGCCTCCATCAT
CACCATCGCCGGCCCCAACGGTTCGGGCAAGACCACGCTGCTGGACGCCATGCGCACGCTGCTGGGCCTGCGCTGCTCGG
CCCCGCGCGACTACCGCACCTATGCCCGCCATGCCGGCGCGCAGACCGCGTGGCTGCGCGCGGTCGTGGACAACCGCCCG
CAGGGCCGCCAGACCTCCAGCCGGCCCTTCGCGCGCCGGCTGCTGTACGCCGATCAGGTCACGCTCGCCTGCCGCATCGA
CAAGAACGGCGGCGACTGGCAGCGGCGCTACTGCCTGCTCGACGGCGATGTCTCCATCGAGCAGTTGCGCGATACGCCCG
AGAAGGATCTCGGCTTCATGGGCGTGGAGGCCTGGGGCCGCGTGCTCGGCGCGGCCGGCCTGTCTCCCGCCATCGCCCGC
GTGCTGTCGCTCGAGCAGGGGCAGACCGACCGGCTGTGCGAATTCAGCCCGCGCGAACTGCTTCGGCTCGTCTTCGACGT
GTTCGGCGACCAGCAGGTGCTCGATGCCTACGACCAGGCGCGCGAACACCAGCAGCAGCTCTCGCGCGAAATGGCGCAGG
CCGAGCGCGAGCTCGACCACAGCCGCGCCCAGCTCACGGAACTGAGCAACCGCGTGACCAGCTACAAGACCTGGCAGCTC
AAGCTGGCCGAACGCGAGCGGCTCGCCACCGAGGTCCTGCCCGTGCTCGGCTGGCACGGTGAGCGTGAAGGCCTGGCGAA
GCAGGCGCGCGAACTGCGCCGCCAGAAGACACAGCACCGCGCCGCGCTGGCCGAGCAGGCCGCGCAGAACAAGCGCCTGC
TCACGCTGCTGGACGAAAGCACCCGCGCCCAGGCCGATGCCGAGCGCCTGCGCGCCGAACGCGACGAAGCACGCTCGGCC
CTGGACGACGCCACGCGCCACGAGGCACCGCTGGAGCAGCTGGCCAAGCGCGAGGCCGAACTGCTCGCGCTGGTGGACAA
GGGCAGCAACGCCGACGAGCTGCAGGCCCACCTGCGGCAACTGCAGGAGCAGGAGTCCGCCGCGCAGGACGAGCGCTCCG
CGCTGCAGCAGCGCCGCCGGATCGCGCAGGACGCCCTCAAGGCGCTCGAAGGCCAGTCGCTGCCGCCCCTGCCGCCCGAG
GTGCAGCAGTTCCGCAGGCGCCTCACGGCCCAGGGGATCGGCCACCAGTTCGTGGCCGAGGTGATCGAGGTGGTGGACGA
GGCCTGGCGCGCCGCGATCGAAGGCGTGCTGCGCGGCCACCGCTGGGTGGTGCTGCTCGACAAGGAAAGCGATCTGGCCG
AGGCCTACGACATCGGCGAGCGCGAGCGCTACCGCCATTACCTGGTCGGCCCCGGCGAAAAGCCGCTGCGCGGCGAGCCC
GGTACCCTGCTAGCCCATGTGCGCTTCACGGCGCCCGTGCCGCGCTGGCTGGTGCAGCAGTTGCAGCAGCTGCGCTGCGT
GGCCGACCCGCGCGAAGGCAAGCGCCTGGGCGGCACCTGGATCACGCCCCAGGCCTACATGCACGACGGGCGCGGGGCGC
GCTCCATGTGGGTGGAGCCGCGCGACCACCAGTTCGGCGCCGCCGCCGTGCAGGCGCGCCGCGCCGCCGCCGAGCGCGAC
CTCGCGCAGATCGACGGCCAGCTCGCGCCCGTGCTCGACCGGCTCATGGCCCTGAAGCGGCAGATCACCGATACCCGCCG
CGCGCTCGAAGGCCACAGCGCCGCGGAAGAGCTGGCGCGCCGCAGCGAAGAGTTCGCCCAGGCGCGCGAGGAATTGCCGG
CGGCCAGGCAGGCGCGCATCGCCGCGGCCCAGCGCTGGCAGCGCCTGGACACCGAGGCTGCGCGCGTGCACGACCGCCAC
CGCGCCTTCACGGAGGAACACCAGCGGCTGGAGCAGCAGTTGCGGCGCTCGCGCAGCGATACCGAACGCGCCGCGCAGGA
ATGGACCGCGCGCCGCCGCGGGCACGTGGAGGCCGCAGCGCGCAGCCAGGCGCAGCGCCGCCAGTTCCCCGCCCGCTGGA
CGGCCGCGGAGACACTGAGCGCACTGGTGGACGAGTACGTGAACGACACCCAGGCGAAGCTGCGCCTGGCCGCCGTCGAG
CAGGAGCTGGAACAGGGCACCTGGGAGCAGGACGCCACCGTGGAGGAGCGCTATCGCCGCATGGAAGCCACCGTGCGCGA
GCAGGGCCTGAGCCTGTCGGACCACCAGGTCAAGAACGCCCAGGCCGGCACGGCCGTGATGAACGCGCGCGAAAGCTACA
TCGAGGTGCTGCGCAGCACCGTGCGGCGCTACCGCAAGAACATCCAGGAACTCGGCGCCCTGGCGGGCGTGGAGGTGGCG
GCCGACCTGCCGCTGCTGGAGAACGACGACACCGTGCTCGCCCAGGCGGGCCTCAAGGTGCATTTCGCGTTCGACGGCAA
GGGCAGCATCGGCCTCAACGACGGCGAGGCCTCGGGCGGCCAGCAGGTCATCAAGTCGCTGATCCTGCTCGTGGGGCTGC
TCAAGGACGAGGAAAGCGGCTCGGGCGGCTTCGTCTTCATCGACGAGCCCTTCGCCCACCTGGACGTGCGCAACATCCAG
CTGGTGGGCCACTTCCTGCGGTCCACCCAGGCGCAGTACGTGCTGACCACCCCCATCACCCACAACCTGGAAGTGTTCGA
GCCGGCCGAGATCACGCTCGTGACCAGCAAGAAGCCCCAGGGCTCGCGCTGGGCCCCGCCCATCGCCGTGGCCAAGCGGC
GCGGCGTGCCGCAGCTGGCGCCGATGGCGGGATAG

Upstream 100 bases:

>100_bases
GCGCCGCGGCACCGGCGGCACCGGACGCTGCCGCCGACGCCGCCGCCCCTTCTTCCGGGTCCGAGACCCCCACGGCCTGA
CCGGGCCTCTCCACCCGCAC

Downstream 100 bases:

>100_bases
CGGGGAGGCCGTGGCGGCGCTCGTGGTGCCGGCGGACCGCGGCGACCCGGACGGCTCGAGGAAACGCTCGAACGCGCCGA
CCGGCGCTCTACACGGCCAA

Product: SMC domain-containing protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; Smc Domain Protein

Number of amino acids: Translated: 944; Mature: 944

Protein sequence:

>944_residues
MFHLQTLELVHWDYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRTYARHAGAQTAWLRAVVDNRP
QGRQTSSRPFARRLLYADQVTLACRIDKNGGDWQRRYCLLDGDVSIEQLRDTPEKDLGFMGVEAWGRVLGAAGLSPAIAR
VLSLEQGQTDRLCEFSPRELLRLVFDVFGDQQVLDAYDQAREHQQQLSREMAQAERELDHSRAQLTELSNRVTSYKTWQL
KLAERERLATEVLPVLGWHGEREGLAKQARELRRQKTQHRAALAEQAAQNKRLLTLLDESTRAQADAERLRAERDEARSA
LDDATRHEAPLEQLAKREAELLALVDKGSNADELQAHLRQLQEQESAAQDERSALQQRRRIAQDALKALEGQSLPPLPPE
VQQFRRRLTAQGIGHQFVAEVIEVVDEAWRAAIEGVLRGHRWVVLLDKESDLAEAYDIGERERYRHYLVGPGEKPLRGEP
GTLLAHVRFTAPVPRWLVQQLQQLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEPRDHQFGAAAVQARRAAAERD
LAQIDGQLAPVLDRLMALKRQITDTRRALEGHSAAEELARRSEEFAQAREELPAARQARIAAAQRWQRLDTEAARVHDRH
RAFTEEHQRLEQQLRRSRSDTERAAQEWTARRRGHVEAAARSQAQRRQFPARWTAAETLSALVDEYVNDTQAKLRLAAVE
QELEQGTWEQDATVEERYRRMEATVREQGLSLSDHQVKNAQAGTAVMNARESYIEVLRSTVRRYRKNIQELGALAGVEVA
ADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGGQQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQ
LVGHFLRSTQAQYVLTTPITHNLEVFEPAEITLVTSKKPQGSRWAPPIAVAKRRGVPQLAPMAG

Sequences:

>Translated_944_residues
MFHLQTLELVHWDYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRTYARHAGAQTAWLRAVVDNRP
QGRQTSSRPFARRLLYADQVTLACRIDKNGGDWQRRYCLLDGDVSIEQLRDTPEKDLGFMGVEAWGRVLGAAGLSPAIAR
VLSLEQGQTDRLCEFSPRELLRLVFDVFGDQQVLDAYDQAREHQQQLSREMAQAERELDHSRAQLTELSNRVTSYKTWQL
KLAERERLATEVLPVLGWHGEREGLAKQARELRRQKTQHRAALAEQAAQNKRLLTLLDESTRAQADAERLRAERDEARSA
LDDATRHEAPLEQLAKREAELLALVDKGSNADELQAHLRQLQEQESAAQDERSALQQRRRIAQDALKALEGQSLPPLPPE
VQQFRRRLTAQGIGHQFVAEVIEVVDEAWRAAIEGVLRGHRWVVLLDKESDLAEAYDIGERERYRHYLVGPGEKPLRGEP
GTLLAHVRFTAPVPRWLVQQLQQLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEPRDHQFGAAAVQARRAAAERD
LAQIDGQLAPVLDRLMALKRQITDTRRALEGHSAAEELARRSEEFAQAREELPAARQARIAAAQRWQRLDTEAARVHDRH
RAFTEEHQRLEQQLRRSRSDTERAAQEWTARRRGHVEAAARSQAQRRQFPARWTAAETLSALVDEYVNDTQAKLRLAAVE
QELEQGTWEQDATVEERYRRMEATVREQGLSLSDHQVKNAQAGTAVMNARESYIEVLRSTVRRYRKNIQELGALAGVEVA
ADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGGQQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQ
LVGHFLRSTQAQYVLTTPITHNLEVFEPAEITLVTSKKPQGSRWAPPIAVAKRRGVPQLAPMAG
>Mature_944_residues
MFHLQTLELVHWDYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRTYARHAGAQTAWLRAVVDNRP
QGRQTSSRPFARRLLYADQVTLACRIDKNGGDWQRRYCLLDGDVSIEQLRDTPEKDLGFMGVEAWGRVLGAAGLSPAIAR
VLSLEQGQTDRLCEFSPRELLRLVFDVFGDQQVLDAYDQAREHQQQLSREMAQAERELDHSRAQLTELSNRVTSYKTWQL
KLAERERLATEVLPVLGWHGEREGLAKQARELRRQKTQHRAALAEQAAQNKRLLTLLDESTRAQADAERLRAERDEARSA
LDDATRHEAPLEQLAKREAELLALVDKGSNADELQAHLRQLQEQESAAQDERSALQQRRRIAQDALKALEGQSLPPLPPE
VQQFRRRLTAQGIGHQFVAEVIEVVDEAWRAAIEGVLRGHRWVVLLDKESDLAEAYDIGERERYRHYLVGPGEKPLRGEP
GTLLAHVRFTAPVPRWLVQQLQQLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEPRDHQFGAAAVQARRAAAERD
LAQIDGQLAPVLDRLMALKRQITDTRRALEGHSAAEELARRSEEFAQAREELPAARQARIAAAQRWQRLDTEAARVHDRH
RAFTEEHQRLEQQLRRSRSDTERAAQEWTARRRGHVEAAARSQAQRRQFPARWTAAETLSALVDEYVNDTQAKLRLAAVE
QELEQGTWEQDATVEERYRRMEATVREQGLSLSDHQVKNAQAGTAVMNARESYIEVLRSTVRRYRKNIQELGALAGVEVA
ADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGGQQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQ
LVGHFLRSTQAQYVLTTPITHNLEVFEPAEITLVTSKKPQGSRWAPPIAVAKRRGVPQLAPMAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 106362; Mature: 106362

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHLQTLELVHWDYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRT
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
YARHAGAQTAWLRAVVDNRPQGRQTSSRPFARRLLYADQVTLACRIDKNGGDWQRRYCLL
HHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHEEEEE
DGDVSIEQLRDTPEKDLGFMGVEAWGRVLGAAGLSPAIARVLSLEQGQTDRLCEFSPREL
CCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
LRLVFDVFGDQQVLDAYDQAREHQQQLSREMAQAERELDHSRAQLTELSNRVTSYKTWQL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KLAERERLATEVLPVLGWHGEREGLAKQARELRRQKTQHRAALAEQAAQNKRLLTLLDES
EHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
TRAQADAERLRAERDEARSALDDATRHEAPLEQLAKREAELLALVDKGSNADELQAHLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LQEQESAAQDERSALQQRRRIAQDALKALEGQSLPPLPPEVQQFRRRLTAQGIGHQFVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
VIEVVDEAWRAAIEGVLRGHRWVVLLDKESDLAEAYDIGERERYRHYLVGPGEKPLRGEP
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHCEEEECCCCCCCCCCC
GTLLAHVRFTAPVPRWLVQQLQQLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEP
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
RDHQFGAAAVQARRAAAERDLAQIDGQLAPVLDRLMALKRQITDTRRALEGHSAAEELAR
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RSEEFAQAREELPAARQARIAAAQRWQRLDTEAARVHDRHRAFTEEHQRLEQQLRRSRSD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TERAAQEWTARRRGHVEAAARSQAQRRQFPARWTAAETLSALVDEYVNDTQAKLRLAAVE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QELEQGTWEQDATVEERYRRMEATVREQGLSLSDHQVKNAQAGTAVMNARESYIEVLRST
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
VRRYRKNIQELGALAGVEVAADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGG
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCH
QQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQLVGHFLRSTQAQYVLTTPIT
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEECCCC
HNLEVFEPAEITLVTSKKPQGSRWAPPIAVAKRRGVPQLAPMAG
CCCEEECCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFHLQTLELVHWDYCQRVALPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRT
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
YARHAGAQTAWLRAVVDNRPQGRQTSSRPFARRLLYADQVTLACRIDKNGGDWQRRYCLL
HHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHEEEEE
DGDVSIEQLRDTPEKDLGFMGVEAWGRVLGAAGLSPAIARVLSLEQGQTDRLCEFSPREL
CCCCCHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
LRLVFDVFGDQQVLDAYDQAREHQQQLSREMAQAERELDHSRAQLTELSNRVTSYKTWQL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
KLAERERLATEVLPVLGWHGEREGLAKQARELRRQKTQHRAALAEQAAQNKRLLTLLDES
EHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH
TRAQADAERLRAERDEARSALDDATRHEAPLEQLAKREAELLALVDKGSNADELQAHLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LQEQESAAQDERSALQQRRRIAQDALKALEGQSLPPLPPEVQQFRRRLTAQGIGHQFVAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
VIEVVDEAWRAAIEGVLRGHRWVVLLDKESDLAEAYDIGERERYRHYLVGPGEKPLRGEP
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHCEEEECCCCCCCCCCC
GTLLAHVRFTAPVPRWLVQQLQQLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEP
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
RDHQFGAAAVQARRAAAERDLAQIDGQLAPVLDRLMALKRQITDTRRALEGHSAAEELAR
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RSEEFAQAREELPAARQARIAAAQRWQRLDTEAARVHDRHRAFTEEHQRLEQQLRRSRSD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TERAAQEWTARRRGHVEAAARSQAQRRQFPARWTAAETLSALVDEYVNDTQAKLRLAAVE
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
QELEQGTWEQDATVEERYRRMEATVREQGLSLSDHQVKNAQAGTAVMNARESYIEVLRST
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
VRRYRKNIQELGALAGVEVAADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGG
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCH
QQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQLVGHFLRSTQAQYVLTTPIT
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEECCCC
HNLEVFEPAEITLVTSKKPQGSRWAPPIAVAKRRGVPQLAPMAG
CCCEEECCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA