| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613394
Identifier: 120613394
GI number: 120613394
Start: 5317529
End: 5318956
Strand: Direct
Name: 120613394
Synonym: Aave_4767
Alternate gene names: NA
Gene position: 5317529-5318956 (Clockwise)
Preceding gene: 120613393
Following gene: 120613395
Centisome position: 99.34
GC content: 75.0
Gene sequence:
>1428_bases ATGATGGCGGCGCGCATGGAATCTTCCACCCCGGCTCCCGGCGCCGACGCCCCCTGGGCGGACCTGGCGGACGCCGATGC CCTGCTGCCCGGCGGCCCGGACGAGGCGTCGGGCGCCCTGTTCGACTTCTTCCGCGACACGGACGCCGCCACGGACGATC CCCTGCTCTGGCGCATCGCGCGCGAGCAGGAGCTGTCGCAGGCGTTGAGCGGGCTGTTCCACGGCCCCGCCGCGCTGGTG CAGCTGCGCCTGTGGGCGTTCCTGCAGCTCGCACGCCAGGGCGAGTCCCAGCTGTCCCGCGAGCGCATCGACGAACTCTT CCACGCGCTGCGGCCCGAGGCGCTGGACACCGTGCTCAAGCGCTTCCGCGACGTGGGCCTGCTGGCCTGGGATGACAGCG TGCGCGCCTATGCGCTGCCCCCCCTCGCGCAGCGCGTGGCCGGCCTGCTGGCGCCGCTGGCCAGCGGCGACGCGGCCGGG CAGGACGCCGAAGGCGGCGAACTGGCCGCGCTGCTCGGGCAGGTCGTGGGCGCGAACCAGCTCGGGGCGCTCGACGCGGG GCAGCTGCAGATGCTGCAGGCGCAGCTCACCCGGCTGCACGGCGAGTTCGCGGACGCGATCGCGAGCGGTTCGGAATTCC GGCTGCGCGCGGCGCGCCAGCGCTACGACCGCGCGGCCCTGCTGATCGACCGGGCCTCCGACGCCATTACCGCCATCATC GGCCATGCTCACGGCCACATCGCCATGGAACGTGCGGCCCGCGCCCTGGGTCAGGCGCAATCGCGCCTGCTGGCGATGGC CAGCCAGTTCAACCGCGCGCTGCAGCAGGTGGACCGCCAGCGCGTGACGCTCGGCACCACCGGCATCACCAGCACCGATG TGAAGCGCTGGCTGCAGACGCTGCGCCAGCCTGCCGCGCTGCTCGACACCGCGCTGGCCGTGCCGGTCGGCCTGTGCGCC CTGGCCCCGCATGAACTGCTGGACGTGACCGAGGCCGAGTTCGAGCGCGACCGCCCCACCCAGGGCCCCGCGGAAGACCT GCCCGGCGCCCAGGAAGCCCCGGCCGGAACGCTGGCCGCCGTGGCCCTGCCGCGCGAACTGGGCGATCTGTCCGATCTGC TGGCGGCCTGGACGCTGGAGGCGCCCGCCGGAGAAGCGGCCGGCGCGCCGCGCGACGTGGCCGCCGCGCTGCTCGGCGCC GAGCCTCATTCCGCCCGCTATGCCCAGGTGGCCTACAAGGCCCAGTTGCTGCCGCTGCTGGGCGATCCGCAGGCCGGCGT GCTGCCCGGCGCCACCGGGGCGCTCGCGCGCCAGCCCTGGCGCGTGGAATGGGAGGCGGCCATCCAGGCCCTGGACCACC CCCAGGTGGAACTGGTGAGCCGGGGTCGGCTGGTTCCCGCGGACCCTCCGCCGGATACCGCCGGCTGA
Upstream 100 bases:
>100_bases ACCTCGCCCTGGAGCGCGGTTTCCTGCCCGCGAGCCTCGGCCCGCGCGTGCTGCGCGCAGAAACGGCCTCGGTGGCGGCG CTTTCGCTGCTGGCCTGCGC
Downstream 100 bases:
>100_bases ACCTGCGGCCTGTTGCCTGCTCCCTGTTTTGGTTTCGTTTTTTCCTGACTGCCTTTTTCGTTTTCGGATGGACCGCTGCC CATGGACGACGCCGCCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MMAARMESSTPAPGADAPWADLADADALLPGGPDEASGALFDFFRDTDAATDDPLLWRIAREQELSQALSGLFHGPAALV QLRLWAFLQLARQGESQLSRERIDELFHALRPEALDTVLKRFRDVGLLAWDDSVRAYALPPLAQRVAGLLAPLASGDAAG QDAEGGELAALLGQVVGANQLGALDAGQLQMLQAQLTRLHGEFADAIASGSEFRLRAARQRYDRAALLIDRASDAITAII GHAHGHIAMERAARALGQAQSRLLAMASQFNRALQQVDRQRVTLGTTGITSTDVKRWLQTLRQPAALLDTALAVPVGLCA LAPHELLDVTEAEFERDRPTQGPAEDLPGAQEAPAGTLAAVALPRELGDLSDLLAAWTLEAPAGEAAGAPRDVAAALLGA EPHSARYAQVAYKAQLLPLLGDPQAGVLPGATGALARQPWRVEWEAAIQALDHPQVELVSRGRLVPADPPPDTAG
Sequences:
>Translated_475_residues MMAARMESSTPAPGADAPWADLADADALLPGGPDEASGALFDFFRDTDAATDDPLLWRIAREQELSQALSGLFHGPAALV QLRLWAFLQLARQGESQLSRERIDELFHALRPEALDTVLKRFRDVGLLAWDDSVRAYALPPLAQRVAGLLAPLASGDAAG QDAEGGELAALLGQVVGANQLGALDAGQLQMLQAQLTRLHGEFADAIASGSEFRLRAARQRYDRAALLIDRASDAITAII GHAHGHIAMERAARALGQAQSRLLAMASQFNRALQQVDRQRVTLGTTGITSTDVKRWLQTLRQPAALLDTALAVPVGLCA LAPHELLDVTEAEFERDRPTQGPAEDLPGAQEAPAGTLAAVALPRELGDLSDLLAAWTLEAPAGEAAGAPRDVAAALLGA EPHSARYAQVAYKAQLLPLLGDPQAGVLPGATGALARQPWRVEWEAAIQALDHPQVELVSRGRLVPADPPPDTAG >Mature_475_residues MMAARMESSTPAPGADAPWADLADADALLPGGPDEASGALFDFFRDTDAATDDPLLWRIAREQELSQALSGLFHGPAALV QLRLWAFLQLARQGESQLSRERIDELFHALRPEALDTVLKRFRDVGLLAWDDSVRAYALPPLAQRVAGLLAPLASGDAAG QDAEGGELAALLGQVVGANQLGALDAGQLQMLQAQLTRLHGEFADAIASGSEFRLRAARQRYDRAALLIDRASDAITAII GHAHGHIAMERAARALGQAQSRLLAMASQFNRALQQVDRQRVTLGTTGITSTDVKRWLQTLRQPAALLDTALAVPVGLCA LAPHELLDVTEAEFERDRPTQGPAEDLPGAQEAPAGTLAAVALPRELGDLSDLLAAWTLEAPAGEAAGAPRDVAAALLGA EPHSARYAQVAYKAQLLPLLGDPQAGVLPGATGALARQPWRVEWEAAIQALDHPQVELVSRGRLVPADPPPDTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50249; Mature: 50249
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAARMESSTPAPGADAPWADLADADALLPGGPDEASGALFDFFRDTDAATDDPLLWRIA CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH REQELSQALSGLFHGPAALVQLRLWAFLQLARQGESQLSRERIDELFHALRPEALDTVLK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH RFRDVGLLAWDDSVRAYALPPLAQRVAGLLAPLASGDAAGQDAEGGELAALLGQVVGANQ HHHHCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC LGALDAGQLQMLQAQLTRLHGEFADAIASGSEFRLRAARQRYDRAALLIDRASDAITAII CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHAHGHIAMERAARALGQAQSRLLAMASQFNRALQQVDRQRVTLGTTGITSTDVKRWLQT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH LRQPAALLDTALAVPVGLCALAPHELLDVTEAEFERDRPTQGPAEDLPGAQEAPAGTLAA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHH VALPRELGDLSDLLAAWTLEAPAGEAAGAPRDVAAALLGAEPHSARYAQVAYKAQLLPLL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GDPQAGVLPGATGALARQPWRVEWEAAIQALDHPQVELVSRGRLVPADPPPDTAG CCCCCCCCCCCCHHHHCCCCCEEHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MMAARMESSTPAPGADAPWADLADADALLPGGPDEASGALFDFFRDTDAATDDPLLWRIA CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH REQELSQALSGLFHGPAALVQLRLWAFLQLARQGESQLSRERIDELFHALRPEALDTVLK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH RFRDVGLLAWDDSVRAYALPPLAQRVAGLLAPLASGDAAGQDAEGGELAALLGQVVGANQ HHHHCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC LGALDAGQLQMLQAQLTRLHGEFADAIASGSEFRLRAARQRYDRAALLIDRASDAITAII CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHAHGHIAMERAARALGQAQSRLLAMASQFNRALQQVDRQRVTLGTTGITSTDVKRWLQT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH LRQPAALLDTALAVPVGLCALAPHELLDVTEAEFERDRPTQGPAEDLPGAQEAPAGTLAA HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHH VALPRELGDLSDLLAAWTLEAPAGEAAGAPRDVAAALLGAEPHSARYAQVAYKAQLLPLL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GDPQAGVLPGATGALARQPWRVEWEAAIQALDHPQVELVSRGRLVPADPPPDTAG CCCCCCCCCCCCHHHHCCCCCEEHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA