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The map label for this gene is hopAE1 [H]

Identifier: 120613356

GI number: 120613356

Start: 5271739

End: 5273664

Strand: Direct

Name: hopAE1 [H]

Synonym: Aave_4728

Alternate gene names: 120613356

Gene position: 5271739-5273664 (Clockwise)

Preceding gene: 120613355

Following gene: 120613358

Centisome position: 98.49

GC content: 71.24

Gene sequence:

>1926_bases
ATGTCTGCGATCAACAGTTCCTCCGTTTCCACTGCAGCCGCGCAGCGGCCCGCATCCCCGCCGGACGCAGCCGCGTCCCC
GGCCAGTCCGCCGCGTGAATCCTTGCGCGCCCAGTTGCCGGCGGGGATTCCCTCCCCGGCCCAGCGGCCCGGCCGCACCG
AAGGCGGCGCCACGCCGCCACGCACCCCCCTGCCAGTGCCTCCCTCGCCATCCGAGTCCTCGGCCGCGTCTGCGGCCGGG
AGCCCGGCCCGGCTCGCCGAGATCGCTCCGGAGGACGCGGGCGCCCCCCCGCCCGGCCCCGCCGGGACGCGGCAGGGCCT
GGGGCAATTCCTCAAGACCATGGGGAGCATGGTCGACGCCCGAACGGCCGTGATGCGCGGCGACGACGCGGAATTCATGC
AGGAGTTCAAGGGCCGGGCAGACCCGGAGCGCGGCGTGCTTCCCGCTGGCAGCACGCTGCCGGAACTGCGGAACGCCGCG
CAGGCGCTGCGTACGCAACTGCTGGAGCAGAACGTTCCCGCCGAACTCCAGACGCGATTCGAAGGGCGGCTCGCGCACCT
GGATTCCACGCTGGAGGCGCTGGAGACCGAGCAGCCGCTGGCACGCCGCGCCGCGGTCTATCTCGGCATGAACGCGCTGC
TGCCCGTCCTGCCCGTCGCCGTCGCCTTCCGCGGCCACCAGAACCAGTTCGAGGCCGAACTGGCAGGCCTCTACGCAAAG
ACCGCCCTGATGGCGATCGGCTCGGCACGCTCCCCCACGGGGGCGAACCGGCACAGCGTCATGGACCATTTCATGTCGCG
CCACTACATCAACGTGGTGCAGGCGGCGCTCTTCGCGTTGCCCACGTTCGTGCCGCAGCTGCAAAAGCTCAACCGTCACC
CTGCCTTCAACGTGGGCGCCGGCATGGTGTCCACCACGGCGCTGTTCCTCGGGTTCCTGGGCAAGGAGATGCGGGAGATC
ACCAACCGCATCCGCCACGGCGTGCCGGATCCGCAGCTCGCCGCAACCGGCACCCGTCTGCAGGAGGCAGCCAGCTTCCC
GGCAGAGCCTGCGGAACCGGCCGCAGACGGCGCAGGCGGCTCGGACGAGGCCGTGCAGGCCGCCCGCGAAGCCGCCGTCC
AGGCGCGCACCGCCCTCTCGCAGGCGCTGGACCTGGCCCGCGCCGACCAGAAGGCCGTCACCGACGCCAAGGCCAGCTTC
CTGGCCCAGGGCGACGGCAAGGAGCTCAGCCCGGTCACCAGCAAGCAGCTGACGCTGGTCGCGGATGCGTTCCTGTCCAT
CGCCACCGACCTGGAACGCGTGCTGCATCCCGCGGGCCTGCCCGAGCAGGCCGCCACGGCCGCCAACGAAGCCCAGCAGG
AGGCCGAGAAAGCCGAACGCATCGCGAAATACGCCCTGGCGGCCTTCACCGGTGCCGTCTGCGCGACCACGACCGGCCTG
ATGTACCCCGACCAGATCGGGATGGTGGACCTGGCGTCCGACGCGGCGTTCACCGTGGCCCTGATGGTCGCCAACGCCCG
CAATCCCAACGTCACGCGCCGCGATGCGCTCGACGAGTTCAAGTCGTTCGCGGGGCTCAGCCTCGTGATGATCGCGGTGC
TGACGGCCAACCACGCCGCGGACGATTTCATCGAGAAGAACACCACCGGCATGCTGGCGGGGGCAGCGGCCATGGCCCTG
CTCAACGTGTCCATTCCCGGACCGGTGGGCCACCTGGCCGGCGCGGGCCTGGAAAAGATGTACGCGGGACTGCAGTCGAT
GCGGCCTGCGGAACTCTCCCAGGCGCTGCGCGGCATCGGGCACAACGCGATCGAGTGGCTGCGGGAGCGGTTCATGGGCG
CGGCACCGGCACCGGTACCGTCGAGCGTCGAGATCCACGAGATCCAGGAGCCGGAGGTTCCGCGCCACGCGCCCGTGGCC
CCCTGA

Upstream 100 bases:

>100_bases
CGCCGCCACCGGCTTCGTGCCTGCGGGCACGTATTCGCGCGCATGCTTACAGAAGATCTCGCGCCCTCCAGACTGCGGTT
TATTTTTCCCGATAAATCCA

Downstream 100 bases:

>100_bases
GCAGGCAGGGGGCATGCCCCTTGCCTACAGCAGGCGCTCCATGTACACCGCCTGCGCGCCATAACCCGCCACGCGTTCGT
GCGCCTCGGCCGATGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type III effector holPsyAE [H]

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MSAINSSSVSTAAAQRPASPPDAAASPASPPRESLRAQLPAGIPSPAQRPGRTEGGATPPRTPLPVPPSPSESSAASAAG
SPARLAEIAPEDAGAPPPGPAGTRQGLGQFLKTMGSMVDARTAVMRGDDAEFMQEFKGRADPERGVLPAGSTLPELRNAA
QALRTQLLEQNVPAELQTRFEGRLAHLDSTLEALETEQPLARRAAVYLGMNALLPVLPVAVAFRGHQNQFEAELAGLYAK
TALMAIGSARSPTGANRHSVMDHFMSRHYINVVQAALFALPTFVPQLQKLNRHPAFNVGAGMVSTTALFLGFLGKEMREI
TNRIRHGVPDPQLAATGTRLQEAASFPAEPAEPAADGAGGSDEAVQAAREAAVQARTALSQALDLARADQKAVTDAKASF
LAQGDGKELSPVTSKQLTLVADAFLSIATDLERVLHPAGLPEQAATAANEAQQEAEKAERIAKYALAAFTGAVCATTTGL
MYPDQIGMVDLASDAAFTVALMVANARNPNVTRRDALDEFKSFAGLSLVMIAVLTANHAADDFIEKNTTGMLAGAAAMAL
LNVSIPGPVGHLAGAGLEKMYAGLQSMRPAELSQALRGIGHNAIEWLRERFMGAAPAPVPSSVEIHEIQEPEVPRHAPVA
P

Sequences:

>Translated_641_residues
MSAINSSSVSTAAAQRPASPPDAAASPASPPRESLRAQLPAGIPSPAQRPGRTEGGATPPRTPLPVPPSPSESSAASAAG
SPARLAEIAPEDAGAPPPGPAGTRQGLGQFLKTMGSMVDARTAVMRGDDAEFMQEFKGRADPERGVLPAGSTLPELRNAA
QALRTQLLEQNVPAELQTRFEGRLAHLDSTLEALETEQPLARRAAVYLGMNALLPVLPVAVAFRGHQNQFEAELAGLYAK
TALMAIGSARSPTGANRHSVMDHFMSRHYINVVQAALFALPTFVPQLQKLNRHPAFNVGAGMVSTTALFLGFLGKEMREI
TNRIRHGVPDPQLAATGTRLQEAASFPAEPAEPAADGAGGSDEAVQAAREAAVQARTALSQALDLARADQKAVTDAKASF
LAQGDGKELSPVTSKQLTLVADAFLSIATDLERVLHPAGLPEQAATAANEAQQEAEKAERIAKYALAAFTGAVCATTTGL
MYPDQIGMVDLASDAAFTVALMVANARNPNVTRRDALDEFKSFAGLSLVMIAVLTANHAADDFIEKNTTGMLAGAAAMAL
LNVSIPGPVGHLAGAGLEKMYAGLQSMRPAELSQALRGIGHNAIEWLRERFMGAAPAPVPSSVEIHEIQEPEVPRHAPVA
P
>Mature_640_residues
SAINSSSVSTAAAQRPASPPDAAASPASPPRESLRAQLPAGIPSPAQRPGRTEGGATPPRTPLPVPPSPSESSAASAAGS
PARLAEIAPEDAGAPPPGPAGTRQGLGQFLKTMGSMVDARTAVMRGDDAEFMQEFKGRADPERGVLPAGSTLPELRNAAQ
ALRTQLLEQNVPAELQTRFEGRLAHLDSTLEALETEQPLARRAAVYLGMNALLPVLPVAVAFRGHQNQFEAELAGLYAKT
ALMAIGSARSPTGANRHSVMDHFMSRHYINVVQAALFALPTFVPQLQKLNRHPAFNVGAGMVSTTALFLGFLGKEMREIT
NRIRHGVPDPQLAATGTRLQEAASFPAEPAEPAADGAGGSDEAVQAAREAAVQARTALSQALDLARADQKAVTDAKASFL
AQGDGKELSPVTSKQLTLVADAFLSIATDLERVLHPAGLPEQAATAANEAQQEAEKAERIAKYALAAFTGAVCATTTGLM
YPDQIGMVDLASDAAFTVALMVANARNPNVTRRDALDEFKSFAGLSLVMIAVLTANHAADDFIEKNTTGMLAGAAAMALL
NVSIPGPVGHLAGAGLEKMYAGLQSMRPAELSQALRGIGHNAIEWLRERFMGAAPAPVPSSVEIHEIQEPEVPRHAPVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS) (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hopW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66878; Mature: 66746

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAINSSSVSTAAAQRPASPPDAAASPASPPRESLRAQLPAGIPSPAQRPGRTEGGATPP
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RTPLPVPPSPSESSAASAAGSPARLAEIAPEDAGAPPPGPAGTRQGLGQFLKTMGSMVDA
CCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RTAVMRGDDAEFMQEFKGRADPERGVLPAGSTLPELRNAAQALRTQLLEQNVPAELQTRF
HHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EGRLAHLDSTLEALETEQPLARRAAVYLGMNALLPVLPVAVAFRGHQNQFEAELAGLYAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TALMAIGSARSPTGANRHSVMDHFMSRHYINVVQAALFALPTFVPQLQKLNRHPAFNVGA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GMVSTTALFLGFLGKEMREITNRIRHGVPDPQLAATGTRLQEAASFPAEPAEPAADGAGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SDEAVQAAREAAVQARTALSQALDLARADQKAVTDAKASFLAQGDGKELSPVTSKQLTLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ADAFLSIATDLERVLHPAGLPEQAATAANEAQQEAEKAERIAKYALAAFTGAVCATTTGL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MYPDQIGMVDLASDAAFTVALMVANARNPNVTRRDALDEFKSFAGLSLVMIAVLTANHAA
CCCCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDFIEKNTTGMLAGAAAMALLNVSIPGPVGHLAGAGLEKMYAGLQSMRPAELSQALRGIG
HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCC
HNAIEWLRERFMGAAPAPVPSSVEIHEIQEPEVPRHAPVAP
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAINSSSVSTAAAQRPASPPDAAASPASPPRESLRAQLPAGIPSPAQRPGRTEGGATPP
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RTPLPVPPSPSESSAASAAGSPARLAEIAPEDAGAPPPGPAGTRQGLGQFLKTMGSMVDA
CCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RTAVMRGDDAEFMQEFKGRADPERGVLPAGSTLPELRNAAQALRTQLLEQNVPAELQTRF
HHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EGRLAHLDSTLEALETEQPLARRAAVYLGMNALLPVLPVAVAFRGHQNQFEAELAGLYAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TALMAIGSARSPTGANRHSVMDHFMSRHYINVVQAALFALPTFVPQLQKLNRHPAFNVGA
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GMVSTTALFLGFLGKEMREITNRIRHGVPDPQLAATGTRLQEAASFPAEPAEPAADGAGG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SDEAVQAAREAAVQARTALSQALDLARADQKAVTDAKASFLAQGDGKELSPVTSKQLTLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ADAFLSIATDLERVLHPAGLPEQAATAANEAQQEAEKAERIAKYALAAFTGAVCATTTGL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MYPDQIGMVDLASDAAFTVALMVANARNPNVTRRDALDEFKSFAGLSLVMIAVLTANHAA
CCCCCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDFIEKNTTGMLAGAAAMALLNVSIPGPVGHLAGAGLEKMYAGLQSMRPAELSQALRGIG
HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCC
HNAIEWLRERFMGAAPAPVPSSVEIHEIQEPEVPRHAPVAP
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12615215 [H]