| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120613335
Identifier: 120613335
GI number: 120613335
Start: 5248183
End: 5250126
Strand: Direct
Name: 120613335
Synonym: Aave_4704
Alternate gene names: NA
Gene position: 5248183-5250126 (Clockwise)
Preceding gene: 120613334
Following gene: 120613336
Centisome position: 98.05
GC content: 71.55
Gene sequence:
>1944_bases ATGCATGCTGACAACCGGGAACCCTCCGTTGCCGTTAGGCACCGGTTCCCGCACCGGCGGTCCACGCCGTCTCCGCCCCA CGGAAGCTCACCCATGCACTCCAATCCCACGGCCCCCGCCGGGCTGCCGCCCGCCGACCCGACGCAGCCTCGCTCCCCCA CCGGACCGGCGGCCCCGGCCTCGCCCGCCATGGCCGCCTTCGCCGCCGCCGGCCTGCTGACCGCATGCGGCGGGAGCAGC GGGGGCGAGCCGGCGTCCCCCGCCGGTGCCAGCGGCACCGCTGCAGGCACGGGGGGCGGAACGGCGGCCACGGCGCCCGC CACGGAAACGGATGCCGTGCGCTTCCTGCTCCAGGCCCAGTTCTCCGCCACCGACGAGGACATCGCCGCCGTGCGCGCCA AAGGCTACGCCGCCTGGCTGGCCGAACAGTTCGCGCAGCCCATCGGCACGACGGGCACCGACTGGCTGGCGCAGCGCGGC TATGGCGTGGCGAACGCGGACACGCGCTACCACAACACGTCCTACCCCGCCGATTACATGCTGTGGAGCCAGCTCTTCAC CGAGCGCGATGCCGTGCGCAAGCGCGTGGCGCTGGCGCTCTCGGAGATCATGGTCGTCTCCACCAATGGACTGAACCAGC CGTGGCCCGCGTTCCTCGCCGCCGGCTACTGGGACGTGCTCAACCAGCATGCGCTCGGCAATTTCCGCGCGCTGCTGGAG GCCGTGACGCTCAACCCCGCCATGGGCGTGTACCTCAACGCCCTGGGCAGCCAGAAGGAGGATGCGCGCACCGGCCGCCA GCCCGACGAGAACTATGCCCGCGAGGTGATGCAGCTCTTCACACTGGGCCTGTACCGGCTGAACGCCGACGGCACCGAGC AGCGCGACGCGAGCGGCAACCGCATCGAGACCTACGGCCCCTCCGACGTGAGCAACCTCGCGCGGGTGTTCACCGGCTAC GACTACGACCGCAGCCAGAACCAGTCGTTCACCGTGGGCACCAGCACCGTGCCGGGGCCCCAGCAGGCGGGGCGGCCGAT GGTGCTGGTCGCCAGCCGGCACTCGGCGCTGGCCGCGACGTTCCTGGGTACGACCATCGGAGCGGGCACCCCGGGCGATG CGGCCCTGAAGACCGCGCTGGATACGCTTTTCAACCACCCCAACGTCGCCCCGTTCATCGGCCGGCAGCTCATCCAGCGG CTGGTGACGAGCAACCCCAGCCCCGCCTACGTGGCGCGGGTGGCGGCCGCCTTCTCGGACAACGGCAGCGGGGTGCGCGG CGACCTGCGCGCCGTGGTGGCAGCGATCCTGCTCGACAGCGAGGCCCGGGATGCCGCAGGCCTGTCCAGCCCCTCCTTCG GCCGACTGCGCGAGCCCATGGTGCGCTTCGTCCAGTGGGGCCGCACCTTCGGCCTGCGGTCGGCCCGCGGCAGCTGGAAG CTCGGCGACCTGAGCGACCCGGCCTCCCGGCTGGGGCAGAGCCCGCTGCGCTCGCCTTCGGTGTTCAATTTCTTCCGCCC CGGCTACGTGCCGCCCTCCACGGCCATCGCGTCCGCCGGGCAGGTGGCGCCGGAGTTCCAGATCGTCACCGAGTCCAGCG TGGGCGGCTACCTGAACTTCATGCAGAACGCGATCCGCAACGGCCTGTTCGTGAACGCTCCCGACCTGCCGCAGAACAAC GCGAGCAACGGCAACAACGGCTTCGACATCACCTGCGACTATGCCGCCCTGCTCCCGCTGGTGACCGATCCGGCCGCACT GGTGCGCAAGGCGGCGCTGCTGCTGTCGGGGGGCCAGATCTCCGATGCCACGCAGGCGCGCATCGCCAATGCGCTGGCAG CCACGCCGGTCACGGCCTCGAGCAGCGCGGCGGCCAAGCTCAACCGCGTGGCCGCAGCCGTCTTCCTGGTCATGGCCTGC CCGGCCTATCTCGTGCAGAAGTGA
Upstream 100 bases:
>100_bases ACCAGCCTCCCGCCCTCCCTGCGCTGGTGGGCGTTTTGACTCGGCCGTACAACGGCCGGCCGCAGGATGACATTTCGTCA CCATTTCCCTGCAATTCAGG
Downstream 100 bases:
>100_bases ACGGCCCGCGCCGTCCCCCCACCGGAGCCCATTCCATGCCGTTCATCGATCCCGCACGACACACGCGCCGCGCCTTCCTG CGCCGCTCGGCCCAGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPASPAMAAFAAAGLLTACGGSS GGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQFSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRG YGVANADTRYHNTSYPADYMLWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGNRIETYGPSDVSNLARVFTGY DYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAATFLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQR LVTSNPSPAYVARVAAAFSDNGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNFMQNAIRNGLFVNAPDLPQNN ASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQISDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMAC PAYLVQK
Sequences:
>Translated_647_residues MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPASPAMAAFAAAGLLTACGGSS GGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQFSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRG YGVANADTRYHNTSYPADYMLWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGNRIETYGPSDVSNLARVFTGY DYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAATFLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQR LVTSNPSPAYVARVAAAFSDNGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNFMQNAIRNGLFVNAPDLPQNN ASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQISDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMAC PAYLVQK >Mature_647_residues MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPASPAMAAFAAAGLLTACGGSS GGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQFSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRG YGVANADTRYHNTSYPADYMLWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGNRIETYGPSDVSNLARVFTGY DYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAATFLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQR LVTSNPSPAYVARVAAAFSDNGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNFMQNAIRNGLFVNAPDLPQNN ASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQISDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMAC PAYLVQK
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67785; Mature: 67785
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPA CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPAMAAFAAAGLLTACGGSSGGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQ CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRGYGVANADTRYHNTSYPADYM HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH LWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGN HHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC RIETYGPSDVSNLARVFTGYDYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAAT EEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHCCCCEEEEECCCHHHHHH FLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQRLVTSNPSPAYVARVAAAFSD HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC NGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNF CCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHH MQNAIRNGLFVNAPDLPQNNASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQI HHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCC SDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMACPAYLVQK CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPA CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPAMAAFAAAGLLTACGGSSGGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQ CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRGYGVANADTRYHNTSYPADYM HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH LWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGN HHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC RIETYGPSDVSNLARVFTGYDYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAAT EEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHCCCCEEEEECCCHHHHHH FLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQRLVTSNPSPAYVARVAAAFSD HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC NGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNF CCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHH MQNAIRNGLFVNAPDLPQNNASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQI HHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCC SDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMACPAYLVQK CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA