| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613305
Identifier: 120613305
GI number: 120613305
Start: 5218350
End: 5218829
Strand: Direct
Name: 120613305
Synonym: Aave_4674
Alternate gene names: NA
Gene position: 5218350-5218829 (Clockwise)
Preceding gene: 120613304
Following gene: 120613306
Centisome position: 97.49
GC content: 72.92
Gene sequence:
>480_bases ATGGACAAAGTCATCGTGTACGTGGACGATGCAGCCTACGCGCAGCAGATCCTCGCCCCCCTGGCCGCCCGCGCCCATGC GCCCGGCACCCACTGGGTGGTCGTGGCCTGCGCTCCGCGCATGACCCACCGCATCAGCAAGTGGGTCAGCCACAGCGCCC GCGAGAACTGGCGCGCCAAGTGGGCCGACAAGCTGTTCGCCCAGGTCCTGCCCTGGCTGCAGGCCGGCGGCTCCACCATC ACCACGGTGCTGGCCAAGGGCCCGCTGCCGGACCTGGCGGCCGAACTGCAGGCGGAGCACGGCAACGCGCAGATCGTCGA TGCGCGCCGCCCCAAGCAGGACGCCCAAGCGCCGCAACCCGCCGCCGCGCCGGCCGCCCAGCCCCTGGTGGTGCGCAAGC CCCTGCCCCGGCGCTGGTCCCTTCCGGGCACGCTGGCCAGCCTGGGAGCGCTGTTCCTGCTGTTCGCCGAGCAGCCCTGA
Upstream 100 bases:
>100_bases CCGCACGGCGGCCGTCCCGCACGGCTGATGCCCGGCCCGGTGAACTCCGGGCCCGCCAGCGACTCGACCCTTCATCGACC AACCCGACAGGAGAGCCTTC
Downstream 100 bases:
>100_bases GCCCCGGCGGGCGCCGGGGGCGCCCTGCCTGCCTGCATGCATGCGCAACGTGAGGAAAGCACCCCGGGTGCTATCCTCCT GCGCCATGAAACTCCTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDKVIVYVDDAAYAQQILAPLAARAHAPGTHWVVVACAPRMTHRISKWVSHSARENWRAKWADKLFAQVLPWLQAGGSTI TTVLAKGPLPDLAAELQAEHGNAQIVDARRPKQDAQAPQPAAAPAAQPLVVRKPLPRRWSLPGTLASLGALFLLFAEQP
Sequences:
>Translated_159_residues MDKVIVYVDDAAYAQQILAPLAARAHAPGTHWVVVACAPRMTHRISKWVSHSARENWRAKWADKLFAQVLPWLQAGGSTI TTVLAKGPLPDLAAELQAEHGNAQIVDARRPKQDAQAPQPAAAPAAQPLVVRKPLPRRWSLPGTLASLGALFLLFAEQP >Mature_159_residues MDKVIVYVDDAAYAQQILAPLAARAHAPGTHWVVVACAPRMTHRISKWVSHSARENWRAKWADKLFAQVLPWLQAGGSTI TTVLAKGPLPDLAAELQAEHGNAQIVDARRPKQDAQAPQPAAAPAAQPLVVRKPLPRRWSLPGTLASLGALFLLFAEQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17241; Mature: 17241
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVIVYVDDAAYAQQILAPLAARAHAPGTHWVVVACAPRMTHRISKWVSHSARENWRAK CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH WADKLFAQVLPWLQAGGSTITTVLAKGPLPDLAAELQAEHGNAQIVDARRPKQDAQAPQP HHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC AAAPAAQPLVVRKPLPRRWSLPGTLASLGALFLLFAEQP CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDKVIVYVDDAAYAQQILAPLAARAHAPGTHWVVVACAPRMTHRISKWVSHSARENWRAK CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH WADKLFAQVLPWLQAGGSTITTVLAKGPLPDLAAELQAEHGNAQIVDARRPKQDAQAPQP HHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC AAAPAAQPLVVRKPLPRRWSLPGTLASLGALFLLFAEQP CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA