| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613280
Identifier: 120613280
GI number: 120613280
Start: 5176173
End: 5177897
Strand: Direct
Name: 120613280
Synonym: Aave_4649
Alternate gene names: NA
Gene position: 5176173-5177897 (Clockwise)
Preceding gene: 120613279
Following gene: 120613283
Centisome position: 96.7
GC content: 72.0
Gene sequence:
>1725_bases ATGCCGCCCCAGCCACCCCACGACAGTTCCCCCTCCACATCTTTGCCCCCCGGCCGCCTGATCGAAGATCCGGCCGCCAC GCCTGCCGCGCAGTCGGCTGCGGCCGCCGAGGCCGCAGCGGCCGCGCAGCTCGGCCAGGACGCCGCACGGCGTGCCGAGC TCTCTCCCCTGGCCCCGCTCGGGGTACCGGTGTTCCGCATGCTGTGGCTCACCTGGCTCGCGGCCAATACCTGCATGTGG ATGAACGACGTCGCGGCCGCGTGGCTGATGACGACGCTCACCACCTCGCCCGTGCTGGTGGCGCTGGTGCAGACGGCCTC GACGCTGCCGGTGTTCCTGCTGGGGCTGCCCAGTGGCGCGCTGGCGGACATCCTGGACCGGCGGCGGTATTTCATCGCCA CGCAGTTCTGGGTGGCCGCGGTGGCGCTGGTGCTGTGCCTGGCGATCCTCGCGGGCGGAATGACGGCGCCGCTGCTGCTG GGCCTGACCTTCGCCAACGGCATCGGCCTGGCGATGCGGTGGCCGGTGTTCGCGGCCATCGTGCCGGAACTGGTCAGCCG CGCGCAGCTGCCCGCGGCACTCGCGCTCAACGGCGTGGCCATGAATGCCTCGCGCATCGTTGGCCCGCTGCTGGCCGGCG CGATCATCGCGAGCGCAGGCAGCGCCTGGGTGTTCGTGCTCAATGCCGTGCTGTCGGTGATCGCAGGCTTCACGATCATG CGCTGGAAGCGCACGCACGTGCCCAATCCGCTGGGCCGCGAGCGGCTCGGCAGCGCGATGCGCGTGGGCGTGCAGTTCGT GCGGGAGTCGCCGCGCATGCGCGCCGTGCTCTGGCGCATCTCGATCTTCTTCCTGCACGCCACGGCCCTGCTCGCGCTGC TGCCGCTGGTGGCGCGCGATCTGGAGGGTGGCGGCGCGGGCACCTTCACGCTGCTGCTGGCATCGATGGGGGCGGGCGCC ATCGCGGCGGCGATGTTCCTGCCGCGGCTGCGCCAGGCCATGCCGCGCGACACGCTGGTGGGCCGCGGGGCGCTGCTGCA GGCGCTCGCCACCTCGGTGGTCGCGATCGCGCCGAACGTCTATGTGGCCGTGCCGGCGATGGTGGTGGGCGGCATGGCCT GGATCACCACCGCGAATTCGTTGAGCGTGTCGGCGCAGCTGGCGCTGCCGAACTGGGTGCGCGCCCGCGGCATGTCGATC TACCAGATGGCGATCATGGGCGCCACGGCGGCCGGCGCGGCCTTCTGGGGGCAGGTGGCGTCGGTGACCAGCGTGCACGT GAGCCTGGCGCTCGCCGCGCTCACCGGCACCGCGGCCATGGCCCTGGTGCAGCGCACCGTGGCGGATCGCTCGATGGAGG AGGATCTCAGCCCTTCACGGGCCTTCAAGGTGCCGACCGCCCCGACGACGCCCGAGCAAGGGCACGTGGTGGTGACCATC GAATACGTGATCGACCCGGCCCGGGCCGCGGAATTCCGCGCGACGATGCGGGAGAGCCGCCGCAGCCGCCTGCGCCAGGG CGCGCTCGACTGGCAGTTGCAGCACGACATCGCCGACCCGAGCCGCTACGTGGAGCGCATCGTGGACGAGTCCTGGACGG AACACCTGCGGCGCTTCGATCGCGTCACCGCCTCGGATGTGGCGCTGCGCGACCGCAAGCTGGCATTCCACGTGGCCGAT GCGCCTCCGGTGGTGACGCGCTACCTGGTCGAGCTGGAGCGCTGA
Upstream 100 bases:
>100_bases CCTTTCGCCGCATCCGAGCCTGCGCATGCGCTGGAACCAAGGCAGAAAGAGCGCGTTGCCCATGGCGCATCAGCGCGCGC TCCCGCAGAATCGGAGGGAC
Downstream 100 bases:
>100_bases GACTCGCCGCCCCAAGTCCCGCAAAGCGCGTCGCGGGGAAATCGAGCCCGGGTTCGTGCCTTTCCGAACTCTTTCGCACC GCAGGTGCCGATGTCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; MFS Transporter; Facilitator Superfamily Permease; Facilitator Superfamily; Transmembrane Efflux Protein; Transport Transmembrane Protein; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; Facilitator Superfamily Transporter; Multidrug ABC Transporter; ABC Transporter Permease Protein; Facilitator Transpoter; Macrolide-Efflux Protein; Permease Of Facilitator Superfamily; Dioxygenase; MFS Family Diterpenoid Transporter
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MPPQPPHDSSPSTSLPPGRLIEDPAATPAAQSAAAAEAAAAAQLGQDAARRAELSPLAPLGVPVFRMLWLTWLAANTCMW MNDVAAAWLMTTLTTSPVLVALVQTASTLPVFLLGLPSGALADILDRRRYFIATQFWVAAVALVLCLAILAGGMTAPLLL GLTFANGIGLAMRWPVFAAIVPELVSRAQLPAALALNGVAMNASRIVGPLLAGAIIASAGSAWVFVLNAVLSVIAGFTIM RWKRTHVPNPLGRERLGSAMRVGVQFVRESPRMRAVLWRISIFFLHATALLALLPLVARDLEGGGAGTFTLLLASMGAGA IAAAMFLPRLRQAMPRDTLVGRGALLQALATSVVAIAPNVYVAVPAMVVGGMAWITTANSLSVSAQLALPNWVRARGMSI YQMAIMGATAAGAAFWGQVASVTSVHVSLALAALTGTAAMALVQRTVADRSMEEDLSPSRAFKVPTAPTTPEQGHVVVTI EYVIDPARAAEFRATMRESRRSRLRQGALDWQLQHDIADPSRYVERIVDESWTEHLRRFDRVTASDVALRDRKLAFHVAD APPVVTRYLVELER
Sequences:
>Translated_574_residues MPPQPPHDSSPSTSLPPGRLIEDPAATPAAQSAAAAEAAAAAQLGQDAARRAELSPLAPLGVPVFRMLWLTWLAANTCMW MNDVAAAWLMTTLTTSPVLVALVQTASTLPVFLLGLPSGALADILDRRRYFIATQFWVAAVALVLCLAILAGGMTAPLLL GLTFANGIGLAMRWPVFAAIVPELVSRAQLPAALALNGVAMNASRIVGPLLAGAIIASAGSAWVFVLNAVLSVIAGFTIM RWKRTHVPNPLGRERLGSAMRVGVQFVRESPRMRAVLWRISIFFLHATALLALLPLVARDLEGGGAGTFTLLLASMGAGA IAAAMFLPRLRQAMPRDTLVGRGALLQALATSVVAIAPNVYVAVPAMVVGGMAWITTANSLSVSAQLALPNWVRARGMSI YQMAIMGATAAGAAFWGQVASVTSVHVSLALAALTGTAAMALVQRTVADRSMEEDLSPSRAFKVPTAPTTPEQGHVVVTI EYVIDPARAAEFRATMRESRRSRLRQGALDWQLQHDIADPSRYVERIVDESWTEHLRRFDRVTASDVALRDRKLAFHVAD APPVVTRYLVELER >Mature_573_residues PPQPPHDSSPSTSLPPGRLIEDPAATPAAQSAAAAEAAAAAQLGQDAARRAELSPLAPLGVPVFRMLWLTWLAANTCMWM NDVAAAWLMTTLTTSPVLVALVQTASTLPVFLLGLPSGALADILDRRRYFIATQFWVAAVALVLCLAILAGGMTAPLLLG LTFANGIGLAMRWPVFAAIVPELVSRAQLPAALALNGVAMNASRIVGPLLAGAIIASAGSAWVFVLNAVLSVIAGFTIMR WKRTHVPNPLGRERLGSAMRVGVQFVRESPRMRAVLWRISIFFLHATALLALLPLVARDLEGGGAGTFTLLLASMGAGAI AAAMFLPRLRQAMPRDTLVGRGALLQALATSVVAIAPNVYVAVPAMVVGGMAWITTANSLSVSAQLALPNWVRARGMSIY QMAIMGATAAGAAFWGQVASVTSVHVSLALAALTGTAAMALVQRTVADRSMEEDLSPSRAFKVPTAPTTPEQGHVVVTIE YVIDPARAAEFRATMRESRRSRLRQGALDWQLQHDIADPSRYVERIVDESWTEHLRRFDRVTASDVALRDRKLAFHVADA PPVVTRYLVELER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61102; Mature: 60971
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPQPPHDSSPSTSLPPGRLIEDPAATPAAQSAAAAEAAAAAQLGQDAARRAELSPLAPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVPVFRMLWLTWLAANTCMWMNDVAAAWLMTTLTTSPVLVALVQTASTLPVFLLGLPSGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCH LADILDRRRYFIATQFWVAAVALVLCLAILAGGMTAPLLLGLTFANGIGLAMRWPVFAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH VPELVSRAQLPAALALNGVAMNASRIVGPLLAGAIIASAGSAWVFVLNAVLSVIAGFTIM HHHHHHHHCCCHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RWKRTHVPNPLGRERLGSAMRVGVQFVRESPRMRAVLWRISIFFLHATALLALLPLVARD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGGGAGTFTLLLASMGAGAIAAAMFLPRLRQAMPRDTLVGRGALLQALATSVVAIAPNV CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHCCCH YVAVPAMVVGGMAWITTANSLSVSAQLALPNWVRARGMSIYQMAIMGATAAGAAFWGQVA HHHHHHHHHCCHHHEEECCCCEEEEEECCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH SVTSVHVSLALAALTGTAAMALVQRTVADRSMEEDLSPSRAFKVPTAPTTPEQGHVVVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEE EYVIDPARAAEFRATMRESRRSRLRQGALDWQLQHDIADPSRYVERIVDESWTEHLRRFD EEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RVTASDVALRDRKLAFHVADAPPVVTRYLVELER CCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure PPQPPHDSSPSTSLPPGRLIEDPAATPAAQSAAAAEAAAAAQLGQDAARRAELSPLAPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVPVFRMLWLTWLAANTCMWMNDVAAAWLMTTLTTSPVLVALVQTASTLPVFLLGLPSGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCH LADILDRRRYFIATQFWVAAVALVLCLAILAGGMTAPLLLGLTFANGIGLAMRWPVFAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH VPELVSRAQLPAALALNGVAMNASRIVGPLLAGAIIASAGSAWVFVLNAVLSVIAGFTIM HHHHHHHHCCCHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RWKRTHVPNPLGRERLGSAMRVGVQFVRESPRMRAVLWRISIFFLHATALLALLPLVARD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEGGGAGTFTLLLASMGAGAIAAAMFLPRLRQAMPRDTLVGRGALLQALATSVVAIAPNV CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHCCCH YVAVPAMVVGGMAWITTANSLSVSAQLALPNWVRARGMSIYQMAIMGATAAGAAFWGQVA HHHHHHHHHCCHHHEEECCCCEEEEEECCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH SVTSVHVSLALAALTGTAAMALVQRTVADRSMEEDLSPSRAFKVPTAPTTPEQGHVVVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEE EYVIDPARAAEFRATMRESRRSRLRQGALDWQLQHDIADPSRYVERIVDESWTEHLRRFD EEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RVTASDVALRDRKLAFHVADAPPVVTRYLVELER CCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA