| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613220
Identifier: 120613220
GI number: 120613220
Start: 5106417
End: 5106785
Strand: Direct
Name: 120613220
Synonym: Aave_4587
Alternate gene names: NA
Gene position: 5106417-5106785 (Clockwise)
Preceding gene: 120613219
Following gene: 120613221
Centisome position: 95.4
GC content: 52.85
Gene sequence:
>369_bases ATGGTAAGCTCCTCCGACCTGTGGGAACAATTGGTCCAGCTTGCGTCGAACATCGACTCGGTAGGCTTGCGCCAGTTGGG GCGCCGTATTACCTACACCAGGGACACTGAATTGGTGAAAGACCTGGGGCTTACGGGGGATGATGCATTCCAATTCATGG AAGATTTTGCATCCAGATTCAATGTCATGACAGGAGATTATCGCTCCGAAGATTACTTTGAACCCGAAGGCCTCTGGCTT CTTTCTGCTTTCAGAAAAAAGAAAGCCACCACCCCGGTGACGCTGGGCATGCTTCTCCTGGCGGCACGCGACGGGATCTG GGATAAGAATCGGCTCGAGCAGGCGTACTACCGGAAAGAATACGACTGA
Upstream 100 bases:
>100_bases TTCCCGGTGTCGGCTGGACTATATTGGCATATGACGTTTTTCAGATCGTCAACAAGATGATAACGACCTACAACGCTCTC GCAAGGGAGGAAGACCGCCT
Downstream 100 bases:
>100_bases GCTTCATCCCTCCTGCAGAAATACATCACCGCGGAATTCATTGTTTCCATCCTTTCTTTCACTTCCATAAAGGACTACCC ATGACCATCAAGATCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVSSSDLWEQLVQLASNIDSVGLRQLGRRITYTRDTELVKDLGLTGDDAFQFMEDFASRFNVMTGDYRSEDYFEPEGLWL LSAFRKKKATTPVTLGMLLLAARDGIWDKNRLEQAYYRKEYD
Sequences:
>Translated_122_residues MVSSSDLWEQLVQLASNIDSVGLRQLGRRITYTRDTELVKDLGLTGDDAFQFMEDFASRFNVMTGDYRSEDYFEPEGLWL LSAFRKKKATTPVTLGMLLLAARDGIWDKNRLEQAYYRKEYD >Mature_122_residues MVSSSDLWEQLVQLASNIDSVGLRQLGRRITYTRDTELVKDLGLTGDDAFQFMEDFASRFNVMTGDYRSEDYFEPEGLWL LSAFRKKKATTPVTLGMLLLAARDGIWDKNRLEQAYYRKEYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14161; Mature: 14161
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSSDLWEQLVQLASNIDSVGLRQLGRRITYTRDTELVKDLGLTGDDAFQFMEDFASRF CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH NVMTGDYRSEDYFEPEGLWLLSAFRKKKATTPVTLGMLLLAARDGIWDKNRLEQAYYRKE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHC YD CC >Mature Secondary Structure MVSSSDLWEQLVQLASNIDSVGLRQLGRRITYTRDTELVKDLGLTGDDAFQFMEDFASRF CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH NVMTGDYRSEDYFEPEGLWLLSAFRKKKATTPVTLGMLLLAARDGIWDKNRLEQAYYRKE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHC YD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA