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The map label for this gene is dadA [H]

Identifier: 120613140

GI number: 120613140

Start: 5006154

End: 5007473

Strand: Direct

Name: dadA [H]

Synonym: Aave_4507

Alternate gene names: 120613140

Gene position: 5006154-5007473 (Clockwise)

Preceding gene: 120613139

Following gene: 120613143

Centisome position: 93.52

GC content: 71.29

Gene sequence:

>1320_bases
ATGCGCGTGATCGTCCTCGGCGCCGGCTTGCTCGGCACCACCTCCGCCTATTTCCTCCAGCAGCTCGGCCACGAAGTGAC
CGTGATCGACCGCCAGGCCACGCCCGGCGCGGAAACCAGCTTCGCCAACGGCGGCCAGATCTCGGTGAGCCACGCCGAGC
CCTGGGCCAACCCGAGCGCCCCGCTCAAGGTATTGCAATGGCTGGGCCGGGAGGACGCGCCGCTGCTCTTCCGGCTGCGC
GCCGACATGCGCCAGTGGCTCTGGGGCCTGCAGTTCCTGCGCGAATGCACGCCGGCGCGCACGCGCCACAACATCGAGCA
GATCGTGCGCCTGGGCACCTACAGCCGCGAAACGCTGCAGCAGCTGCGCCGCGACACCGGCATCCAGTACGACCAGCGCA
CGCAGGGCATCCTGCACTTCTACACCAGCCGCAAGGAATTCGACGGCGCCCTCGCACCGGCCGAACAGATGCGCCAGCTC
GGCTGCGAGCGCCGCGTGGTGAGCGCCGACGAGGCCGTGCGCATCGAGCCGGCCCTGGCCTCCATCCGCTCGCAACTGGC
GGGCGCCACCTACACCGATGCCGACGAATCCGGCGACGCCAACGCCTTCACGCGCGCACTCGCGCAGCGGGCCGAACAGG
CCGGCGTGCGGTTCCGCATGGGCTGCCACATCACGGCGCTGCGCACCGCAGCCGGGGCCATCGACCACGTGGAGATCACC
GATGCGGAAGGCCGCTTCGAGCGCGTGCGCGGCGATGCCTACGTGCTGGCCATGGGCTCGTTCAGCCCGCTGCTGGCCGA
GCCGCTGGGGCTGCGCCTGCCCATCTATCCGGCCAAGGGCTACTCGGTGACGCTGCCCGTGCGCGATGCGTCCGCCGCCT
ACGAGGTCAGCCTGACGGACGACGAATACAAGCTGGTCTTCTCGCGCTACACCCGCGCGGCCCAGGACGGCCAGCCGGCA
CGCGACGTGATGCGCATCGCCGGCACCGCGGAACTCAACGGCTACGGCCGCGACCTCAACCCGGTGCGCTGCGAGGCCAT
CGTGAAACGCGTGGAGCAGTTGTTCCCCGCCGCGGGCGACACCTCGCAGGCGCAGTTCTGGACGGGCCTGCGCCCGGCCA
CGCCGAGCAACGTGCCGCTCATCGGCCGCACGAAGCTTCCCAACCTGTTCCTCAACACCGGCCACGGCACGCTGGGCTGG
ACGCATGCCTGCGGCTCGGGCCGCGCCATCGCCAGCATCGTGAGCGGGATCGTGCCCGAGGTGGATTTCGCCTTCGCGGG
CATGCCGCGCGGCCGCGCCGCCGTGCCGGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
CAGGGGGAGCGGCAGCCGGGCCACGCGCCTGCTGCACGCTATTGAATCCATAGCTGCCTGCACGCGCACGCCCGGCGCTT
CACCCTCGAAAGGTTTGAAG

Downstream 100 bases:

>100_bases
GAGCGGCAGGCAGTACCGTAGTACGGCAAGATGCGGCAACGACGCCGGAAGGGTCGTGTTGGCCGCTCTAAGCTTCGCCC
GGCCCGGCGCAGGTGAACAC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MRVIVLGAGLLGTTSAYFLQQLGHEVTVIDRQATPGAETSFANGGQISVSHAEPWANPSAPLKVLQWLGREDAPLLFRLR
ADMRQWLWGLQFLRECTPARTRHNIEQIVRLGTYSRETLQQLRRDTGIQYDQRTQGILHFYTSRKEFDGALAPAEQMRQL
GCERRVVSADEAVRIEPALASIRSQLAGATYTDADESGDANAFTRALAQRAEQAGVRFRMGCHITALRTAAGAIDHVEIT
DAEGRFERVRGDAYVLAMGSFSPLLAEPLGLRLPIYPAKGYSVTLPVRDASAAYEVSLTDDEYKLVFSRYTRAAQDGQPA
RDVMRIAGTAELNGYGRDLNPVRCEAIVKRVEQLFPAAGDTSQAQFWTGLRPATPSNVPLIGRTKLPNLFLNTGHGTLGW
THACGSGRAIASIVSGIVPEVDFAFAGMPRGRAAVPALA

Sequences:

>Translated_439_residues
MRVIVLGAGLLGTTSAYFLQQLGHEVTVIDRQATPGAETSFANGGQISVSHAEPWANPSAPLKVLQWLGREDAPLLFRLR
ADMRQWLWGLQFLRECTPARTRHNIEQIVRLGTYSRETLQQLRRDTGIQYDQRTQGILHFYTSRKEFDGALAPAEQMRQL
GCERRVVSADEAVRIEPALASIRSQLAGATYTDADESGDANAFTRALAQRAEQAGVRFRMGCHITALRTAAGAIDHVEIT
DAEGRFERVRGDAYVLAMGSFSPLLAEPLGLRLPIYPAKGYSVTLPVRDASAAYEVSLTDDEYKLVFSRYTRAAQDGQPA
RDVMRIAGTAELNGYGRDLNPVRCEAIVKRVEQLFPAAGDTSQAQFWTGLRPATPSNVPLIGRTKLPNLFLNTGHGTLGW
THACGSGRAIASIVSGIVPEVDFAFAGMPRGRAAVPALA
>Mature_439_residues
MRVIVLGAGLLGTTSAYFLQQLGHEVTVIDRQATPGAETSFANGGQISVSHAEPWANPSAPLKVLQWLGREDAPLLFRLR
ADMRQWLWGLQFLRECTPARTRHNIEQIVRLGTYSRETLQQLRRDTGIQYDQRTQGILHFYTSRKEFDGALAPAEQMRQL
GCERRVVSADEAVRIEPALASIRSQLAGATYTDADESGDANAFTRALAQRAEQAGVRFRMGCHITALRTAAGAIDHVEIT
DAEGRFERVRGDAYVLAMGSFSPLLAEPLGLRLPIYPAKGYSVTLPVRDASAAYEVSLTDDEYKLVFSRYTRAAQDGQPA
RDVMRIAGTAELNGYGRDLNPVRCEAIVKRVEQLFPAAGDTSQAQFWTGLRPATPSNVPLIGRTKLPNLFLNTGHGTLGW
THACGSGRAIASIVSGIVPEVDFAFAGMPRGRAAVPALA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=434, Percent_Identity=39.1705069124424, Blast_Score=323, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47920; Mature: 47920

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIVLGAGLLGTTSAYFLQQLGHEVTVIDRQATPGAETSFANGGQISVSHAEPWANPSA
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCH
PLKVLQWLGREDAPLLFRLRADMRQWLWGLQFLRECTPARTRHNIEQIVRLGTYSRETLQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
QLRRDTGIQYDQRTQGILHFYTSRKEFDGALAPAEQMRQLGCERRVVSADEAVRIEPALA
HHHHHHCCCCCHHHCCHHHHHHCCHHCCCCCCCHHHHHHCCHHHCCCCCCCCEEECHHHH
SIRSQLAGATYTDADESGDANAFTRALAQRAEQAGVRFRMGCHITALRTAAGAIDHVEIT
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEHHHHHHCCCCEEEEE
DAEGRFERVRGDAYVLAMGSFSPLLAEPLGLRLPIYPAKGYSVTLPVRDASAAYEVSLTD
CCCCHHHHHCCCEEEEEECCCCHHHHCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECC
DEYKLVFSRYTRAAQDGQPARDVMRIAGTAELNGYGRDLNPVRCEAIVKRVEQLFPAAGD
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCC
TSQAQFWTGLRPATPSNVPLIGRTKLPNLFLNTGHGTLGWTHACGSGRAIASIVSGIVPE
CCCHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHCCC
VDFAFAGMPRGRAAVPALA
CCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVIVLGAGLLGTTSAYFLQQLGHEVTVIDRQATPGAETSFANGGQISVSHAEPWANPSA
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCH
PLKVLQWLGREDAPLLFRLRADMRQWLWGLQFLRECTPARTRHNIEQIVRLGTYSRETLQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH
QLRRDTGIQYDQRTQGILHFYTSRKEFDGALAPAEQMRQLGCERRVVSADEAVRIEPALA
HHHHHHCCCCCHHHCCHHHHHHCCHHCCCCCCCHHHHHHCCHHHCCCCCCCCEEECHHHH
SIRSQLAGATYTDADESGDANAFTRALAQRAEQAGVRFRMGCHITALRTAAGAIDHVEIT
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEHHHHHHCCCCEEEEE
DAEGRFERVRGDAYVLAMGSFSPLLAEPLGLRLPIYPAKGYSVTLPVRDASAAYEVSLTD
CCCCHHHHHCCCEEEEEECCCCHHHHCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECC
DEYKLVFSRYTRAAQDGQPARDVMRIAGTAELNGYGRDLNPVRCEAIVKRVEQLFPAAGD
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCC
TSQAQFWTGLRPATPSNVPLIGRTKLPNLFLNTGHGTLGWTHACGSGRAIASIVSGIVPE
CCCHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCEEECCCCCHHHHHHHHHHCCC
VDFAFAGMPRGRAAVPALA
CCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA