| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120613136
Identifier: 120613136
GI number: 120613136
Start: 5000830
End: 5001849
Strand: Direct
Name: 120613136
Synonym: Aave_4503
Alternate gene names: NA
Gene position: 5000830-5001849 (Clockwise)
Preceding gene: 120613135
Following gene: 120613138
Centisome position: 93.43
GC content: 69.12
Gene sequence:
>1020_bases ATGCGCCGTCTTTCCGACTCCTTCTCCTGGCTGGGTGCCGCCGCGCTCGCCGCCGCGGCCTGGACCGCGTCTTCTCCCGC CCTCGCGGCGGATCCGCACGCCGCCGCCGACTGGCCCCGCCAGCCCGTCACGCTCATCATGGGCTTCCCGGCCGGCTCCG GCGTGGACGTGGTGGCCCGCTCCGTGCAGGAACCCCTCGGCCAGAAGCTCGGCCAGCCGGTCATCATCGACTACAGGTCC GGCGCCGCGGGCAACATCGCCAGCGAATACGTCGCCCGCGCGAAGCCGGACGGCTACACGCTGGCCTTCGGCACCGCGGC CACGCACGGCAGCAATGCCGCGCTCTACAGGAAGCTGCCCTTCGACGTGGAGGCCGACTTCGTGCCCGTGGGCACGCTCA TCGACGTGTCGAACGTGCTCACCGTGAACCCGGACGTGATCGACGCGAAGACGCTGCAGGAATTCGTCGAGATCGTGAAG GCGAACCCCGGCAAGTACAACTACGCCTCCACCGGCAACGGCGCCGGCACCCACATGGCGTTCGCCGAATTCAACGCACG CCTGGGCCTGAACATGGTGCACGTGCCCTACAAGGGCGGCCCGGAGGCCATCACCTCGGTGGTGCGCGGCGAGACCTGCT GCATCATGAACCAGGTGCAGACCGTGTTGCCGCACTACAAGGCCGGCAAGGTGCGGCTGCTGGGCGTGACCACCGCGAAG CCGGTGGGCGCCGTGAAGGAGGTGCCCACCATCGCATCGAGCGGGCTGCCCGGCACCCAGGGCTTCGACAGCTCCATCTG GTTCGGCATCTTCGCGCCCAGGGGCACGGACCCGGCCATCGTGCGCAAGCTCAATACCGCGCTGCGCGAGGTGCTGGAGC AGCCCGAGGTGCGCCAGCGCTTCGAATCGCAGGGCAACACGGTGCGCATCGAAACGCCGGAGCAGTTCGCCCGGACCGTG CGCAAGGACCGGGCCAAGTGGGCGCAGGTGGTGAAGGACGCGAAAATCAGCGTGGACTAG
Upstream 100 bases:
>100_bases AGCCTTGCCCACAATGGCACATTCCCTGCTTCGCACAGGACCGCCCCGCCCGGGCGGCCCCGTCCGGGCAGGGATCCTGT TCTTCCCTGGGACCCTTCGC
Downstream 100 bases:
>100_bases CTGTTGAGTCTCACGAGGTTGTTCACACCCGGAATGCGTGTGATGGGAGGCTGATGGCCGAGCGCGGAGTGTGGCCGGCA CCAGTTGTAGCCGTCAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRRLSDSFSWLGAAALAAAAWTASSPALAADPHAAADWPRQPVTLIMGFPAGSGVDVVARSVQEPLGQKLGQPVIIDYRS GAAGNIASEYVARAKPDGYTLAFGTAATHGSNAALYRKLPFDVEADFVPVGTLIDVSNVLTVNPDVIDAKTLQEFVEIVK ANPGKYNYASTGNGAGTHMAFAEFNARLGLNMVHVPYKGGPEAITSVVRGETCCIMNQVQTVLPHYKAGKVRLLGVTTAK PVGAVKEVPTIASSGLPGTQGFDSSIWFGIFAPRGTDPAIVRKLNTALREVLEQPEVRQRFESQGNTVRIETPEQFARTV RKDRAKWAQVVKDAKISVD
Sequences:
>Translated_339_residues MRRLSDSFSWLGAAALAAAAWTASSPALAADPHAAADWPRQPVTLIMGFPAGSGVDVVARSVQEPLGQKLGQPVIIDYRS GAAGNIASEYVARAKPDGYTLAFGTAATHGSNAALYRKLPFDVEADFVPVGTLIDVSNVLTVNPDVIDAKTLQEFVEIVK ANPGKYNYASTGNGAGTHMAFAEFNARLGLNMVHVPYKGGPEAITSVVRGETCCIMNQVQTVLPHYKAGKVRLLGVTTAK PVGAVKEVPTIASSGLPGTQGFDSSIWFGIFAPRGTDPAIVRKLNTALREVLEQPEVRQRFESQGNTVRIETPEQFARTV RKDRAKWAQVVKDAKISVD >Mature_339_residues MRRLSDSFSWLGAAALAAAAWTASSPALAADPHAAADWPRQPVTLIMGFPAGSGVDVVARSVQEPLGQKLGQPVIIDYRS GAAGNIASEYVARAKPDGYTLAFGTAATHGSNAALYRKLPFDVEADFVPVGTLIDVSNVLTVNPDVIDAKTLQEFVEIVK ANPGKYNYASTGNGAGTHMAFAEFNARLGLNMVHVPYKGGPEAITSVVRGETCCIMNQVQTVLPHYKAGKVRLLGVTTAK PVGAVKEVPTIASSGLPGTQGFDSSIWFGIFAPRGTDPAIVRKLNTALREVLEQPEVRQRFESQGNTVRIETPEQFARTV RKDRAKWAQVVKDAKISVD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 36143; Mature: 36143
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLSDSFSWLGAAALAAAAWTASSPALAADPHAAADWPRQPVTLIMGFPAGSGVDVVAR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH SVQEPLGQKLGQPVIIDYRSGAAGNIASEYVARAKPDGYTLAFGTAATHGSNAALYRKLP HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECC FDVEADFVPVGTLIDVSNVLTVNPDVIDAKTLQEFVEIVKANPGKYNYASTGNGAGTHMA CCCCCCEEECCHHEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FAEFNARLGLNMVHVPYKGGPEAITSVVRGETCCIMNQVQTVLPHYKAGKVRLLGVTTAK HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCC PVGAVKEVPTIASSGLPGTQGFDSSIWFGIFAPRGTDPAIVRKLNTALREVLEQPEVRQR CCCHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHH FESQGNTVRIETPEQFARTVRKDRAKWAQVVKDAKISVD HHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRLSDSFSWLGAAALAAAAWTASSPALAADPHAAADWPRQPVTLIMGFPAGSGVDVVAR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHH SVQEPLGQKLGQPVIIDYRSGAAGNIASEYVARAKPDGYTLAFGTAATHGSNAALYRKLP HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECC FDVEADFVPVGTLIDVSNVLTVNPDVIDAKTLQEFVEIVKANPGKYNYASTGNGAGTHMA CCCCCCEEECCHHEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FAEFNARLGLNMVHVPYKGGPEAITSVVRGETCCIMNQVQTVLPHYKAGKVRLLGVTTAK HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCC PVGAVKEVPTIASSGLPGTQGFDSSIWFGIFAPRGTDPAIVRKLNTALREVLEQPEVRQR CCCHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHH FESQGNTVRIETPEQFARTVRKDRAKWAQVVKDAKISVD HHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]