| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120613134
Identifier: 120613134
GI number: 120613134
Start: 4999812
End: 5000066
Strand: Direct
Name: 120613134
Synonym: Aave_4501
Alternate gene names: NA
Gene position: 4999812-5000066 (Clockwise)
Preceding gene: 120613132
Following gene: 120613135
Centisome position: 93.41
GC content: 68.63
Gene sequence:
>255_bases ATGACGTTGCACGAGTACCTCCAACAGCACGGCGCTCTGAGCGTCCGGCAGCTGCGGCTGCGCATGGCGCAGTACGGCTC GCCGATCAAGAGCGATGCGCAGATCCGGCAATGGCAGCACGGCTACGCGCGGCGCATTCCCTCTCCGCTGAATTGCGTGG CCATCGAACAGGCCACGGGCGGCCAGGTCACGCGCAAGGACCTGCGCCCGCACGACTGGGCCGCCATCTGGCCGGAACTG GGCACGGCGCGCTGA
Upstream 100 bases:
>100_bases GGTTTCGTCCATGGGCCGGAAAGTAGCACACGCTACGGTTGCTTTTGCTACTTTGTAAAAATAGAATCCAGAGCAATTGC TACTTTCCACGGGGCGGGAC
Downstream 100 bases:
>100_bases CGCCCTGGCACGGGGGCGAGGGGCGGGAAACACCTGCTCACACCGCTTCGCACGGCGGCGACACCGGGATGACACGGCGT TGACGCGCGGCGGCGACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MTLHEYLQQHGALSVRQLRLRMAQYGSPIKSDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPHDWAAIWPEL GTAR
Sequences:
>Translated_84_residues MTLHEYLQQHGALSVRQLRLRMAQYGSPIKSDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPHDWAAIWPEL GTAR >Mature_83_residues TLHEYLQQHGALSVRQLRLRMAQYGSPIKSDAQIRQWQHGYARRIPSPLNCVAIEQATGGQVTRKDLRPHDWAAIWPELG TAR
Specific function: Unknown
COG id: COG4197
COG function: function code S; Uncharacterized protein conserved in bacteria, prophage-related
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9631; Mature: 9500
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHEYLQQHGALSVRQLRLRMAQYGSPIKSDAQIRQWQHGYARRIPSPLNCVAIEQATG CCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC GQVTRKDLRPHDWAAIWPELGTAR CCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TLHEYLQQHGALSVRQLRLRMAQYGSPIKSDAQIRQWQHGYARRIPSPLNCVAIEQATG CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC GQVTRKDLRPHDWAAIWPELGTAR CCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA