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The map label for this gene is tse [H]

Identifier: 120613082

GI number: 120613082

Start: 4940283

End: 4942100

Strand: Direct

Name: tse [H]

Synonym: Aave_4446

Alternate gene names: 120613082

Gene position: 4940283-4942100 (Clockwise)

Preceding gene: 120613079

Following gene: 120613086

Centisome position: 92.29

GC content: 70.46

Gene sequence:

>1818_bases
GTGCAGTTTCTGAAGAACATCCGGCTGGGCACCATGCTCGGCATCGGTTTCGCCATCGTCATCGGCCTCAGCTTCATGGT
CGCCGCCTATGGCCGCTTCCAGCTCGACTCTACCGGCAAGACCCTGCATGCCCTGTCGAAGGAGCGGATGGACATCCTGC
TGCAGCTCCAGCAGGTCAAGGACAACACCAACGTCGTCGCCCGCGCGGTACGCAACCTGGCCCTGCTGGAAGACGAGGCC
GCCATGGCCGAAGAGAAGAAGCGGCTCGATGGCGTGGTCTCCGACACCTCGCAGATCATGGCCGCGCTGCAGCAGCGGGT
GGTTTCCGCCGAAGGCCGCGCGCTCATGGGCCGCATCGCCGAGGCGCGCCCGCAATTCCTGGGCACCGTGGACAAGGCGG
CGAAGCTCGGCCTGGCCAACGACCTGGCGAATGCGCGCACGGTGGTGCTCGGCGAGATGCGCACCGCGCAGAACGTCTAC
TTCAAGGCCGTGGAGGACATGATCTCCTACCAGCGCAAGGTGACCACGGACATGGCGGAATCGTCCAGCAGCGGTGCTAC
CGCCGCCGGCAACACCATGATCGTGCTGGCAGTGCTGTCGGCTGCGATCGGCGCGCTCGTCGCCTGGTCGATCACGCGCC
GCGTGAAGAGCCAGCTCGGCGGCGAACCCGCCTACGCCGCTCGGATCGCCCAGGAGGTCGCCCGCGGCAACCTCGCCGTC
CACGTCGACCTGCGCCCCGGCGACTCCTCCTCCGTCCTCGCCGCCATGGGCGCCATGCGCGCCAACCTCGCTAAAGTAGT
CTCCGAAGTCCGCCACAGCAGCGAATCCATCGCCACCGGCGCTTCCCAGATCGCCACCGGCAACGCCGACCTCAGCCAGC
GCACCGAGGAGCAGGCCTCCAACCTCCAGCAGACCGCCGCCTCCATGGAGGAGATGGCCTCCACCGTCAAGCAGAACGCC
GACACCGTGCGCACCGCCTCCCAGCTCGCCTCCTCGGCCTCCGCCACCGCCGCGCGCGGCGGCGACGTCGTGGGCAACGT
CGTGCGCACCATGGAGGACATCACCGCCTCCTCCCGCAAGATCGGCGACATCATCGGCGTCATCGACTCCATCGCCTTCC
AGACCAACATCCTCGCGCTCAACGCCGCCGTCGAGGCCGCACGCGCCGGCGAGCAGGGCCGGGGCTTCGCCGTCGTCGCC
GGCGAGGTGCGCACCCTCGCGCAGCGCTCCGCACAGGCCGCCAAGGAGATCAAGGCCCTCATCGGCGAGAGCGTCTCCAA
GGTCGAGACCGGCTCGCAGCTCGTGGGCGAGGCCGGCACCACCATGGGAGAGATCGTCGAGCAGGCCCGCCGCGTCGCCG
ACCTCATCGCCGAGATCGGAGCGGCCACCCACGAGCAGGAGCAGGGCATCTCCCAGGTGAGCGACGCCGTCAACCAGCTC
GACCAGGTCACCCAGCAGAACGCCGCGCTCGTGGAGGAATCCGCCGCCGCCGCCGACAGCCTCAACTCCCAGGCCGCGCG
CCTCGTGCAGCTCGTCAGCGTCTTCCAGGTCGATGCCGCCGCCTCCCAGGCCGTCATCGCACAGGCGCAGTCGCGCAGCC
GCGATACCGCCCGCGCCGCCTCCGCCGCGCTGCAGCATGCCAAGGCACCGGCTGCCGCGCAGCGCACGGCTCCCGGCATC
GCCGCCGCACCGGCAAAGCCCGCCCGGGCATCTGCGCCGGCCGCCACCCGCCCGGCACTCGCTCCTGCCCAGCAGCCGGC
CGCTCCCGCCCCCGCCAGGGCCGCCGGGTCCGGCAACGACGACTGGGAAACCTTCTGA

Upstream 100 bases:

>100_bases
GCTCTAAAAGCCCAACCACATTAAAAAAATCAATACACAACGGCTATCGTGGTGATAACTTTCCCAGAATCTTTTACAAA
AAGTATTCTTGGGAGAACCC

Downstream 100 bases:

>100_bases
CCCCGGGAGTCACTCCCGCCGGGTCGCGGTCCGCTGCCGCATCTGCCATGCGGCATCCACCGCCAGCATGCACAGCAGCG
AGAGACCCAGCAGGGGCAGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MQFLKNIRLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVKDNTNVVARAVRNLALLEDEA
AMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIAEARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVY
FKAVEDMISYQRKVTTDMAESSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKSQLGGEPAYAARIAQEVARGNLAV
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASQIATGNADLSQRTEEQASNLQQTAASMEEMASTVKQNA
DTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRKIGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRTLAQRSAQAAKEIKALIGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDAAASQAVIAQAQSRSRDTARAASAALQHAKAPAAAQRTAPGI
AAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGNDDWETF

Sequences:

>Translated_605_residues
MQFLKNIRLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVKDNTNVVARAVRNLALLEDEA
AMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIAEARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVY
FKAVEDMISYQRKVTTDMAESSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKSQLGGEPAYAARIAQEVARGNLAV
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASQIATGNADLSQRTEEQASNLQQTAASMEEMASTVKQNA
DTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRKIGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRTLAQRSAQAAKEIKALIGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDAAASQAVIAQAQSRSRDTARAASAALQHAKAPAAAQRTAPGI
AAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGNDDWETF
>Mature_605_residues
MQFLKNIRLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVKDNTNVVARAVRNLALLEDEA
AMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIAEARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVY
FKAVEDMISYQRKVTTDMAESSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKSQLGGEPAYAARIAQEVARGNLAV
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASQIATGNADLSQRTEEQASNLQQTAASMEEMASTVKQNA
DTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRKIGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRTLAQRSAQAAKEIKALIGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDAAASQAVIAQAQSRSRDTARAASAALQHAKAPAAAQRTAPGI
AAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGNDDWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=379, Percent_Identity=50.6596306068602, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI1788194, Length=292, Percent_Identity=55.8219178082192, Blast_Score=288, Evalue=9e-79,
Organism=Escherichia coli, GI2367378, Length=288, Percent_Identity=60.4166666666667, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1787690, Length=388, Percent_Identity=46.6494845360825, Blast_Score=283, Evalue=3e-77,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=42.8134556574924, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62709; Mature: 62709

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLKNIRLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVK
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
DNTNVVARAVRNLALLEDEAAMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH
EARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVYFKAVEDMISYQRKVTTDMAE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKSQLGGEPAYAARIAQEVARGNLAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASQIATGNADLSQRTEEQAS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHH
NLQQTAASMEEMASTVKQNADTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAQAAKEIKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDAAASQAVIAQAQSRSRDTARAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SAALQHAKAPAAAQRTAPGIAAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGND
HHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DWETF
CCCCC
>Mature Secondary Structure
MQFLKNIRLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVK
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
DNTNVVARAVRNLALLEDEAAMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH
EARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVYFKAVEDMISYQRKVTTDMAE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKSQLGGEPAYAARIAQEVARGNLAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASQIATGNADLSQRTEEQAS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHH
NLQQTAASMEEMASTVKQNADTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAQAAKEIKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDAAASQAVIAQAQSRSRDTARAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SAALQHAKAPAAAQRTAPGIAAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGND
HHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DWETF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]