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The map label for this gene is flgF [H]

Identifier: 120613060

GI number: 120613060

Start: 4916955

End: 4917695

Strand: Direct

Name: flgF [H]

Synonym: Aave_4424

Alternate gene names: 120613060

Gene position: 4916955-4917695 (Clockwise)

Preceding gene: 120613059

Following gene: 120613061

Centisome position: 91.86

GC content: 70.99

Gene sequence:

>741_bases
ATGGACCACATCATCTACACCTCCATGACGGGCGCCAGCGCCGCCGCGCAACGGCAGGCGGTGCTGGCCAACAACCTCGC
GAACGCCTCCACCAACGGCTTCCGCGCGGAAATGTCCACCTTCCGCTCGGTGCCCGTGCAGGGCGACGGCTCCAAGACCC
GCGTGTTCGCGCTGGAGGCGACCTCCGGCCACGTGGAAACGCCCGGCCCCGTGCAGCGCACCGGCCGCAACCTGGATGCG
ATGGCGGTGGGCAACGCGTGGTTCGCGGTGCAGGGGCTGGACGGCACCGAGGCCTACACCCGCAACGGCAGCTTCGAGGT
GAATGCGGAGGGCCAGCTGCGCACTTCCAACGGGCTCACCGTGCTGTCGGACGGCGGCGGCCCGATCGACGTGCCGCCCG
GCGCCGACGTGACGCTGGGCTCGGACGGCACCCTCACCGCGCGCGTGGCGGGCCAGCAGGCCACGCCGATCGGAAGGCTC
AAGCTCGCCACCCCGACGCCGGAAGACCCGCTCAAGCGGGGCGACGACGCGCTCTTTCGCACCGCATCGGGCGACCCGAT
ACCCAACGACCCGAACGCGCGGCTGCTGTCCGGCGCGCTGGAGGGCTCCAACGTGAACGCCGTGGAAAGCATGGTCGGCA
TGATCGCCGCCTCCCGGCAGTTCGAGGCCCAGATGCGGCTGCTGCAGACGGCCGAGACCAACGACAAGACAGCCGCCCAG
CTGCTCAGCCTGAACGGCTGA

Upstream 100 bases:

>100_bases
CAGGACCAGGTGATGTCCACGCTGGTGAACCTGCGCTGACGGCCCGACCCCGCTGATCCGCCACTGAACTCCGAACCCCT
TCCTTCATCCAGGCCGAGCG

Downstream 100 bases:

>100_bases
CGACCGCGCCGACGACACCCCGCACGCCAAGCCCAAGCACGCATTCCCCGAGGAACCGCCATGATCAACTCGCTCTGGAT
CGCCAAGACCGGCATGTCCG

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSVPVQGDGSKTRVFALEATSGHVETPGPVQRTGRNLDA
MAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNGLTVLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRL
KLATPTPEDPLKRGDDALFRTASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQ
LLSLNG

Sequences:

>Translated_246_residues
MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSVPVQGDGSKTRVFALEATSGHVETPGPVQRTGRNLDA
MAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNGLTVLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRL
KLATPTPEDPLKRGDDALFRTASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQ
LLSLNG
>Mature_246_residues
MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSVPVQGDGSKTRVFALEATSGHVETPGPVQRTGRNLDA
MAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNGLTVLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRL
KLATPTPEDPLKRGDDALFRTASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQ
LLSLNG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=254, Percent_Identity=46.0629921259843, Blast_Score=201, Evalue=5e-53,
Organism=Escherichia coli, GI1787318, Length=264, Percent_Identity=29.1666666666667, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25498; Mature: 25498

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSVPVQGDGSKTRVFALEA
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEE
TSGHVETPGPVQRTGRNLDAMAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNGLT
CCCCCCCCCCHHHCCCCCEEEEECCEEEEEECCCCCHHEECCCCEEEECCCEEEECCCEE
VLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRLKLATPTPEDPLKRGDDALFR
EEECCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHCCCCCEEE
TASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQ
ECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LLSLNG
HHCCCC
>Mature Secondary Structure
MDHIIYTSMTGASAAAQRQAVLANNLANASTNGFRAEMSTFRSVPVQGDGSKTRVFALEA
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEE
TSGHVETPGPVQRTGRNLDAMAVGNAWFAVQGLDGTEAYTRNGSFEVNAEGQLRTSNGLT
CCCCCCCCCCHHHCCCCCEEEEECCEEEEEECCCCCHHEECCCCEEEECCCEEEECCCEE
VLSDGGGPIDVPPGADVTLGSDGTLTARVAGQQATPIGRLKLATPTPEDPLKRGDDALFR
EEECCCCEECCCCCCCEEECCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHCCCCCEEE
TASGDPIPNDPNARLLSGALEGSNVNAVESMVGMIAASRQFEAQMRLLQTAETNDKTAAQ
ECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LLSLNG
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]