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The map label for this gene is flgD [H]

Identifier: 120613058

GI number: 120613058

Start: 4914910

End: 4915560

Strand: Direct

Name: flgD [H]

Synonym: Aave_4422

Alternate gene names: 120613058

Gene position: 4914910-4915560 (Clockwise)

Preceding gene: 120613057

Following gene: 120613059

Centisome position: 91.82

GC content: 65.75

Gene sequence:

>651_bases
ATGATCCTCAACCCCATCGGCTCCACGGCCACCGTGAACACGGGCTCCAGCTCGAACTCCGCCACCGATCCGGCCGCTGC
GCAGGACCGCTTCCTGAAACTGCTGGTGGCGCAGCTCAACAACCAGGATCCTATGAATCCGCTGGACAACGCCCAGATGA
CCTCGCAGATGGCGCAGATCAACACGGTGACGGGCATCCAGCAGCTCAACCTGAGCATGCAGACCATGGCCGAACAGTTC
TCGACCATGCAGACCCTGCAGGGCACGATGATGATCGGCCGCAGCGTGCTGACCGAGGGTTCCAAGATGACCTTCAAGGA
CAGCGCCGGCACCGGATCCTTCGACCTCAAGGGCGCCGCCACCGACGTCAAGGTGGAGGTCGTCACGGCGGGCGGCCAGG
TGGTCGATACGGTGGACGTGGGCGCGAGCGCGGCAGGACGCCACGACTTCACCTGGGACGGCAGCAAGTACAGCGGCACC
CACAGCGACCTGAAGTTCCGCGTGGTGGCGTCCACCAAGGACGGCGCCGTCGAGGCGACGCCGCTCATGCAGGCCAAGGT
GGTGGGCACCGGCTCCAACGCGGGCGCCCTCACGCTGAACCTGGACACGGGCGGCACCGTGAACTACAGCAACATCCGCG
CGGTGCTCTGA

Upstream 100 bases:

>100_bases
CGCTCCTACCAGAACAACGTCGAGGTCCTCAACACCACCAAGTCGCTGCTGCTCAAGACGCTGCAGATGGGCCAGTAATC
CCTTCCTGAAGGACCGCACC

Downstream 100 bases:

>100_bases
CGGCCTCGCGCATTCCGCAAGACAACACCCCTTTTCGTCCCCCGAGGAGAGCACCATGAGCTTCCAGCAAGGCCTGTCAG
GCCTCAACGCGGCCAGCAAG

Product: flagellar hook capping protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MILNPIGSTATVNTGSSSNSATDPAAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQMAQINTVTGIQQLNLSMQTMAEQF
STMQTLQGTMMIGRSVLTEGSKMTFKDSAGTGSFDLKGAATDVKVEVVTAGGQVVDTVDVGASAAGRHDFTWDGSKYSGT
HSDLKFRVVASTKDGAVEATPLMQAKVVGTGSNAGALTLNLDTGGTVNYSNIRAVL

Sequences:

>Translated_216_residues
MILNPIGSTATVNTGSSSNSATDPAAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQMAQINTVTGIQQLNLSMQTMAEQF
STMQTLQGTMMIGRSVLTEGSKMTFKDSAGTGSFDLKGAATDVKVEVVTAGGQVVDTVDVGASAAGRHDFTWDGSKYSGT
HSDLKFRVVASTKDGAVEATPLMQAKVVGTGSNAGALTLNLDTGGTVNYSNIRAVL
>Mature_216_residues
MILNPIGSTATVNTGSSSNSATDPAAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQMAQINTVTGIQQLNLSMQTMAEQF
STMQTLQGTMMIGRSVLTEGSKMTFKDSAGTGSFDLKGAATDVKVEVVTAGGQVVDTVDVGASAAGRHDFTWDGSKYSGT
HSDLKFRVVASTKDGAVEATPLMQAKVVGTGSNAGALTLNLDTGGTVNYSNIRAVL

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=204, Percent_Identity=37.7450980392157, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 22457; Mature: 22457

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNPIGSTATVNTGSSSNSATDPAAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQMAQI
CEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
NTVTGIQQLNLSMQTMAEQFSTMQTLQGTMMIGRSVLTEGSKMTFKDSAGTGSFDLKGAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCC
TDVKVEVVTAGGQVVDTVDVGASAAGRHDFTWDGSKYSGTHSDLKFRVVASTKDGAVEAT
CEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEC
PLMQAKVVGTGSNAGALTLNLDTGGTVNYSNIRAVL
CCEEEEEEECCCCCCEEEEEECCCCEEEHHCEEEEC
>Mature Secondary Structure
MILNPIGSTATVNTGSSSNSATDPAAAQDRFLKLLVAQLNNQDPMNPLDNAQMTSQMAQI
CEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
NTVTGIQQLNLSMQTMAEQFSTMQTLQGTMMIGRSVLTEGSKMTFKDSAGTGSFDLKGAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCC
TDVKVEVVTAGGQVVDTVDVGASAAGRHDFTWDGSKYSGTHSDLKFRVVASTKDGAVEAT
CEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEC
PLMQAKVVGTGSNAGALTLNLDTGGTVNYSNIRAVL
CCEEEEEEECCCCCCEEEEEECCCCEEEHHCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]