| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611852
Identifier: 120611852
GI number: 120611852
Start: 3523572
End: 3523979
Strand: Direct
Name: 120611852
Synonym: Aave_3193
Alternate gene names: NA
Gene position: 3523572-3523979 (Clockwise)
Preceding gene: 120611851
Following gene: 120611853
Centisome position: 65.83
GC content: 59.8
Gene sequence:
>408_bases ATGAAGCTTCCCAACCTCAAGAACGTGCCCTGCATCGTCTGGTGCCTGGGCCTGAACGCGTTGCTCTTGGCGGGATGGGC TCTGGCAACGCCCACCTTCGCAGATGCCGAAAACAGCCCGCACCGGGTGTACCGCCTGGAGTTCCACAAAGCCTCTTTTC TGCAGCGCATCACCCACCCGAGCTTCAAGATGCCCTATGTGGTTCGGCTGTATCGCATTGAGCCCAAGACCTTGCTGGGC CAGAGCGAAGTGGTCGATCTCTGGTTGAACGGCGAAATCCACTGGTATCTGGACCCGCCCGTCGAACTGAGCCGCGTGCA CGTAGGCCAGGATGTCACCTTCGAGAACATCCCACCGGAATGCACCAAAGAGGCGCAGATACCGGGCTGCCCTGATACCA AGCCCTGA
Upstream 100 bases:
>100_bases ACATCCCTCCGGAATGCACGGAAGCGGCACAGCTACAGGGTTGTCCTAACACCAAGCCTTGACGAACGCTTCCTGTGGCA CCACATCGCACGCAGTGGTA
Downstream 100 bases:
>100_bases AGATTGCTCCCAGGTGTGCACCATGCGCACCTCCACTGCTGATCCCAGGCAGTCGTGATGAACCTGTTCAACCTCAAGAA CGCCCCCTGCATCGTCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKLPNLKNVPCIVWCLGLNALLLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHPSFKMPYVVRLYRIEPKTLLG QSEVVDLWLNGEIHWYLDPPVELSRVHVGQDVTFENIPPECTKEAQIPGCPDTKP
Sequences:
>Translated_135_residues MKLPNLKNVPCIVWCLGLNALLLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHPSFKMPYVVRLYRIEPKTLLG QSEVVDLWLNGEIHWYLDPPVELSRVHVGQDVTFENIPPECTKEAQIPGCPDTKP >Mature_135_residues MKLPNLKNVPCIVWCLGLNALLLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHPSFKMPYVVRLYRIEPKTLLG QSEVVDLWLNGEIHWYLDPPVELSRVHVGQDVTFENIPPECTKEAQIPGCPDTKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15388; Mature: 15388
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPNLKNVPCIVWCLGLNALLLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHP CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCC SFKMPYVVRLYRIEPKTLLGQSEVVDLWLNGEIHWYLDPPVELSRVHVGQDVTFENIPPE CCCCCEEEEEEEECCHHHCCCCEEEEEEECCEEEEEECCCCCEEEEECCCCCEECCCCCC CTKEAQIPGCPDTKP CCCCCCCCCCCCCCC >Mature Secondary Structure MKLPNLKNVPCIVWCLGLNALLLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHP CCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCC SFKMPYVVRLYRIEPKTLLGQSEVVDLWLNGEIHWYLDPPVELSRVHVGQDVTFENIPPE CCCCCEEEEEEEECCHHHCCCCEEEEEEECCEEEEEECCCCCEEEEECCCCCEECCCCCC CTKEAQIPGCPDTKP CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA