| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is livK [C]
Identifier: 120611818
GI number: 120611818
Start: 3488612
End: 3489742
Strand: Reverse
Name: livK [C]
Synonym: Aave_3159
Alternate gene names: 120611818
Gene position: 3489742-3488612 (Counterclockwise)
Preceding gene: 120611819
Following gene: 120611816
Centisome position: 65.2
GC content: 63.93
Gene sequence:
>1131_bases ATGCAATTGAAGTTGAAACTGACCGTGGTTGCCGCTATCGCGGCGTTTGCCGGTGTCGCCTCTGCACAAGAACAGGTGGT GAAGATCGGCCACGTGGGACCGGTTTCCGGCCCCCAGGCTCACTACGGCAAGGACAACGAAAACGGCGCCCGCATGGCCG TCGAGGAACTGAATGCCCAGGGGGTCACGATCGGCGGCAAGAAGATCAAGTTCGAATTGCAGGCCGAAGACGACGCTGCA GATCCGAAGCAGGGCACGGCCGCTGCCCAGAAGCTGTGCGACGCCAAGGTCGCCGGCGTGGTGGGCCACTTGAACTCCGG CACTACGATCCCCGCATCGAAGGTGTACAACGACTGCGGCATCCCGCACGTCACCGGCGCCGCAACCAACCCCAACCTGA CCAAGCCCGGCTACAAGACCACGTTCCGCATCATCGCGAACGACAACGCCCTGGGCGCCGGCCTGGCCGCCTACGCCGCC GACACGCTGAAGCTCAAGACCGTGGCCATCATCGACGACCGCACGGCCTACGGCCAGGGCGTGGCCGACGTGTTCAAGAA GACCGCCGCCGCGAAGGGCATCAAGGTGGTGGACGAGCAGTTCACGACCGACAAGGCCACCGACTTCATGGCCATCCTGA CGGCCATCAAGTCCAAGAACCCCGACGCCATCTTCTACGGCGGCATGGACCCGCAGGCCGGCCCCATGCTGCGCCAGATG GAACAGCTGGGCATGGCCAACGTGAAGTACTTCGGCGGCGACGGCATCTGCACGGCCGAAGTGGCCAAGCTGGCCGCTGG CGCCAAGACCCTGGCGAACGTGATCTGCGCCGAAGGCGGCGCTTCCCTGGCCAAGATGCCCGGCGGCACGGCCTGGAAGG CCAAGTACGATGCCAAGTACCCCGGCCAGTTCCAGGTGTACAGCCCCTACACCTACGACGCCACCATGCTGCTGGTCGAT GCCATGAAGCGTGCCAACTCGTGGGATTCGAAGGTGTACATCCCCGAGCTGGCCAAGTCCAACTACAAGGGCGTGACGGC CCAGATCGCCTTCGAGCCCAATGGCGAACTGAAGAACCCGGCCATCACCCTGTACACGTACAAGGACGGCAAGAAGACGC CCCTGAACTGA
Upstream 100 bases:
>100_bases TTTCCCTCGCATCTACGAGTGCCCTGGCCCACAAATTGCGATATGTTTCCGGCGCTGGGGGAAAGAAGGTTCTCAGCGAT CACCCTTTTTGGAGATTCAT
Downstream 100 bases:
>100_bases TCGGCCCCCGCTTCAGTGCGAAGGCCTCCGCGGTGCGGAGGCCTTTTTTCATTCGCCGCGGCGCCGGCGCCGCAGGCTGG CTCTGGCGTGTCGCGAGCCA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MQLKLKLTVVAAIAAFAGVASAQEQVVKIGHVGPVSGPQAHYGKDNENGARMAVEELNAQGVTIGGKKIKFELQAEDDAA DPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTFRIIANDNALGAGLAAYAA DTLKLKTVAIIDDRTAYGQGVADVFKKTAAAKGIKVVDEQFTTDKATDFMAILTAIKSKNPDAIFYGGMDPQAGPMLRQM EQLGMANVKYFGGDGICTAEVAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYPGQFQVYSPYTYDATMLLVD AMKRANSWDSKVYIPELAKSNYKGVTAQIAFEPNGELKNPAITLYTYKDGKKTPLN
Sequences:
>Translated_376_residues MQLKLKLTVVAAIAAFAGVASAQEQVVKIGHVGPVSGPQAHYGKDNENGARMAVEELNAQGVTIGGKKIKFELQAEDDAA DPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTFRIIANDNALGAGLAAYAA DTLKLKTVAIIDDRTAYGQGVADVFKKTAAAKGIKVVDEQFTTDKATDFMAILTAIKSKNPDAIFYGGMDPQAGPMLRQM EQLGMANVKYFGGDGICTAEVAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYPGQFQVYSPYTYDATMLLVD AMKRANSWDSKVYIPELAKSNYKGVTAQIAFEPNGELKNPAITLYTYKDGKKTPLN >Mature_376_residues MQLKLKLTVVAAIAAFAGVASAQEQVVKIGHVGPVSGPQAHYGKDNENGARMAVEELNAQGVTIGGKKIKFELQAEDDAA DPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCGIPHVTGAATNPNLTKPGYKTTFRIIANDNALGAGLAAYAA DTLKLKTVAIIDDRTAYGQGVADVFKKTAAAKGIKVVDEQFTTDKATDFMAILTAIKSKNPDAIFYGGMDPQAGPMLRQM EQLGMANVKYFGGDGICTAEVAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKYPGQFQVYSPYTYDATMLLVD AMKRANSWDSKVYIPELAKSNYKGVTAQIAFEPNGELKNPAITLYTYKDGKKTPLN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=376, Percent_Identity=32.4468085106383, Blast_Score=168, Evalue=5e-43, Organism=Escherichia coli, GI48994941, Length=266, Percent_Identity=34.9624060150376, Blast_Score=146, Evalue=2e-36,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39541; Mature: 39541
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKLKLTVVAAIAAFAGVASAQEQVVKIGHVGPVSGPQAHYGKDNENGARMAVEELNAQ CEEEEEHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC GVTIGGKKIKFELQAEDDAADPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCG CEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCC IPHVTGAATNPNLTKPGYKTTFRIIANDNALGAGLAAYAADTLKLKTVAIIDDRTAYGQG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCEEEEEEEEEECCCHHCCC VADVFKKTAAAKGIKVVDEQFTTDKATDFMAILTAIKSKNPDAIFYGGMDPQAGPMLRQM HHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH EQLGMANVKYFGGDGICTAEVAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKY HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC PGQFQVYSPYTYDATMLLVDAMKRANSWDSKVYIPELAKSNYKGVTAQIAFEPNGELKNP CCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCEEEEEEECCCCCCCCC AITLYTYKDGKKTPLN EEEEEEECCCCCCCCC >Mature Secondary Structure MQLKLKLTVVAAIAAFAGVASAQEQVVKIGHVGPVSGPQAHYGKDNENGARMAVEELNAQ CEEEEEHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC GVTIGGKKIKFELQAEDDAADPKQGTAAAQKLCDAKVAGVVGHLNSGTTIPASKVYNDCG CEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCC IPHVTGAATNPNLTKPGYKTTFRIIANDNALGAGLAAYAADTLKLKTVAIIDDRTAYGQG CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCEEEEEEEEEECCCHHCCC VADVFKKTAAAKGIKVVDEQFTTDKATDFMAILTAIKSKNPDAIFYGGMDPQAGPMLRQM HHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH EQLGMANVKYFGGDGICTAEVAKLAAGAKTLANVICAEGGASLAKMPGGTAWKAKYDAKY HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC PGQFQVYSPYTYDATMLLVDAMKRANSWDSKVYIPELAKSNYKGVTAQIAFEPNGELKNP CCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCEEEEEEECCCCCCCCC AITLYTYKDGKKTPLN EEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA