| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611802
Identifier: 120611802
GI number: 120611802
Start: 3467950
End: 3468831
Strand: Direct
Name: 120611802
Synonym: Aave_3142
Alternate gene names: NA
Gene position: 3467950-3468831 (Clockwise)
Preceding gene: 120611801
Following gene: 120611803
Centisome position: 64.79
GC content: 67.57
Gene sequence:
>882_bases ATGTCCCTCTTTTCCCTGCTCGGCGCCGTCGAGATCGGGCTGATCTTCAGCCTGGTCGCGCTGGGCGTCTTCATCTCGTT TAGGCTGCTGCGCTTTCCCGACCTGACGGTGGACGGCAGTTTCCCGCTGGGCGGCGCGGTATGCGCCGTGCTCATCTCCA CGGGCACCAACCCCTACGTGGCCACGCTCGCGGCCACCGCGGCAGGCGCGGCGGCCGGCCTCGTCACCGGCTGGCTCAAC GTCAAGCTCAAGATCATGGACCTGCTGGCCAGCATCCTGATGATGATCGCGCTCTATTCGATCAACCTGCGCATCATGGG CGGCCCCAACGTGCCGCTCATCAACGACCCGACCCTGTTCACGCTGCTGCAGCCCGAGGGCCTGGCCGACTACATCGCCC GCCCCGCCCTGCTGCTGGTGATCGTGATCGCCGCCAAGCTGGCCATGGACTGGTTCTTCGCCACCGAACGCGGCCTGGCC ATCCGGGCGACCGGCTCCAACGCCCGCATGGCCCGCGCCCAGGGCGTGAACACCGGCGCCATGGTGCTGCTGGGCATGGC CGTGTCGAACGCGCTGGTGGCCCTCGCCGGCGCGCTCTTCGCGCAGACGCAGGGCGGCTCGGACATCTCCATGGGCATCG GCACCATCGTGATCGGCCTGGCCGCCGTGATCGTGGGCGAGAGCATCCTGCCCTCGCGCCGGCTGGTGTGGGCGACGCTC GCCGTCGTCATCGGTGCCATCGTCTATCGCTTCTTCATCGCGCTGGCGCTCAACAGCGACTTCATCGGCCTGAAGGCGCA GGACCTGAACCTGGTGACGGCGGTGCTGGTGACGGTCGCCCTGGTGATCCCCCAAATCAAACGCAAGCTCGCGTCGAAAT GA
Upstream 100 bases:
>100_bases TGAAGTAAGGTTCGAGGTTCCGCTCCCGGCGCGCGCCGGGAACACCCATGACCGCAGGAGCCTCGGCTCCTGTTTCGTTT TTCCCGAAGCCTTCCCCGCC
Downstream 100 bases:
>100_bases AGTACATCCCCCTGAGGCGCTGCGCGCCTTCCCCCTTCTCTCGGCTGCGCCGGGAAGGGGGACGCCGCCAGCGCGGCGGG GCGGCCCTTGCGCGGCGGCC
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYVATLAATAAGAAAGLVTGWLN VKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLFTLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLA IRATGSNARMARAQGVNTGAMVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK
Sequences:
>Translated_293_residues MSLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYVATLAATAAGAAAGLVTGWLN VKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLFTLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLA IRATGSNARMARAQGVNTGAMVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK >Mature_292_residues SLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYVATLAATAAGAAAGLVTGWLNV KLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLFTLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLAI RATGSNARMARAQGVNTGAMVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATLA VVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK
Specific function: Unknown
COG id: COG4120
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30478; Mature: 30347
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCHH ATLAATAAGAAAGLVTGWLNVKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEE TLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLAIRATGSNARMARAQGVNTGA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCHHH MVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLFSLLGAVEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVCAVLISTGTNPYV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCHH ATLAATAAGAAAGLVTGWLNVKLKIMDLLASILMMIALYSINLRIMGGPNVPLINDPTLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEE TLLQPEGLADYIARPALLLVIVIAAKLAMDWFFATERGLAIRATGSNARMARAQGVNTGA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCHHH MVLLGMAVSNALVALAGALFAQTQGGSDISMGIGTIVIGLAAVIVGESILPSRRLVWATL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AVVIGAIVYRFFIALALNSDFIGLKAQDLNLVTAVLVTVALVIPQIKRKLASK HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]