Click here to switch to the map view.

The map label for this gene is 120611776

Identifier: 120611776

GI number: 120611776

Start: 3440462

End: 3441031

Strand: Direct

Name: 120611776

Synonym: Aave_3116

Alternate gene names: NA

Gene position: 3440462-3441031 (Clockwise)

Preceding gene: 120611775

Following gene: 120611777

Centisome position: 64.27

GC content: 68.95

Gene sequence:

>570_bases
ATGCGCCGCAATAATCCCGGGATGCCCTCCACCACGCCCCGCGACCTCGAAGCCCCCTCTCCCGAAGCGCCGCCCCACGC
CCCCCCTGCCCCGTCCATCCCGCTGCGCACCCCTTCGCTGCGCAGGCGCATGGCCTGCTGGGTGTACGAAGGCATCCTGA
TGTTCGGGGTCGTTTTCATCTCCGGCTATCTGTTCGATTCGCTGAGCCAGTCACGCCACGCGCTGGATCTCCGGGCGCTG
CGCATGGGATTCCTGTTCGTGGTCTTCGGCATCTATTTCACGTGGTTCTGGGCCAAGGGCCAGACGCTGGCCATGAAGAC
CTGGCACATCCGGCTGCGGGACCGCCACGGCGCCCCGGTGACACAGGCGCGTGCGCTCTGGCGCTACGTGCTGAGCTGGC
TGTGGTTCCTGCCCCCGCTCGCCATCGTCGGCCCGCTGGGCCTGGGTGCGGGCGAGATCACCGTCATCACCCTGGGCTGG
GTGCTCGTCTGGGCGCTCCTCAGCCGCTTCCACCCCCAGCGCCAGTTCTGGCACGATGCCTGGGCCGGCACCCGGCTGGT
GCAGGCCTGA

Upstream 100 bases:

>100_bases
GCAGTGGCCGGGCCGTTGCCGCCCCTGTCCTCGGCTTCCGAGCCCTCCGCGCCTGCGGCGTCGCCGTCCTCCCAGGAATC
CAAGGACAGCGAGTCGCAGT

Downstream 100 bases:

>100_bases
CGGCGCATGCCCCGGCCGGCAGGCTGCCCGCTCCGCCCGGCAGGCCCCGCCCCCGCACGCACTGTCACGGCCCACGGCGA
AACTGCCCGATCCTTCCCTA

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; RDD Family Protein; Transmembrane Protein; RDD Family; RDD Family Membrane Protein; RDD Domain Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRRNNPGMPSTTPRDLEAPSPEAPPHAPPAPSIPLRTPSLRRRMACWVYEGILMFGVVFISGYLFDSLSQSRHALDLRAL
RMGFLFVVFGIYFTWFWAKGQTLAMKTWHIRLRDRHGAPVTQARALWRYVLSWLWFLPPLAIVGPLGLGAGEITVITLGW
VLVWALLSRFHPQRQFWHDAWAGTRLVQA

Sequences:

>Translated_189_residues
MRRNNPGMPSTTPRDLEAPSPEAPPHAPPAPSIPLRTPSLRRRMACWVYEGILMFGVVFISGYLFDSLSQSRHALDLRAL
RMGFLFVVFGIYFTWFWAKGQTLAMKTWHIRLRDRHGAPVTQARALWRYVLSWLWFLPPLAIVGPLGLGAGEITVITLGW
VLVWALLSRFHPQRQFWHDAWAGTRLVQA
>Mature_189_residues
MRRNNPGMPSTTPRDLEAPSPEAPPHAPPAPSIPLRTPSLRRRMACWVYEGILMFGVVFISGYLFDSLSQSRHALDLRAL
RMGFLFVVFGIYFTWFWAKGQTLAMKTWHIRLRDRHGAPVTQARALWRYVLSWLWFLPPLAIVGPLGLGAGEITVITLGW
VLVWALLSRFHPQRQFWHDAWAGTRLVQA

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21630; Mature: 21630

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNNPGMPSTTPRDLEAPSPEAPPHAPPAPSIPLRTPSLRRRMACWVYEGILMFGVVFI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGYLFDSLSQSRHALDLRALRMGFLFVVFGIYFTWFWAKGQTLAMKTWHIRLRDRHGAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCH
TQARALWRYVLSWLWFLPPLAIVGPLGLGAGEITVITLGWVLVWALLSRFHPQRQFWHDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
WAGTRLVQA
HHHHHHCCC
>Mature Secondary Structure
MRRNNPGMPSTTPRDLEAPSPEAPPHAPPAPSIPLRTPSLRRRMACWVYEGILMFGVVFI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SGYLFDSLSQSRHALDLRALRMGFLFVVFGIYFTWFWAKGQTLAMKTWHIRLRDRHGAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCH
TQARALWRYVLSWLWFLPPLAIVGPLGLGAGEITVITLGWVLVWALLSRFHPQRQFWHDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
WAGTRLVQA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA