| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611750
Identifier: 120611750
GI number: 120611750
Start: 3408449
End: 3409861
Strand: Reverse
Name: 120611750
Synonym: Aave_3090
Alternate gene names: NA
Gene position: 3409861-3408449 (Counterclockwise)
Preceding gene: 120611751
Following gene: 120611748
Centisome position: 63.7
GC content: 72.05
Gene sequence:
>1413_bases ATGACCCCTCCCCTGAGCCTGGTGCGCCGGATGGCGCCGGGCGGTACGCCCACCGCAGCGGCAGCATTGCAGGAGCGCTA TGCCGAAGTGCGCAGGGCCTCGCTGGCGCTGGCCCTGCCGCTGTCCGACGAAGACTGCTGTGCGCAGTCCATGCCCGACG CGAGCCCCGTCAAATGGCATCTCGCGCACACCACGTGGTTCTTCGAGACTTTCGTGCTCGAGCCGCGCGAGCGCGGTTTC GCCCCGTTCCACCCCGCGTTCCGCGTGCTGTTCAATTCCTACTACAACGGCGTCGGAGACAAGCATCCGCGGCCGCAGCG CGGGCTGCTCACCCGCCCGGCGATGGCGCAGGTGCTGGAGTACCGGCAGGACGTCGATGCCCGCATGGAGCGGCTCATGG CCGGCCTGCAGGGCGACCCCGACCCGGACCTGGAGGCCCTGGTGGAACTCGGGCTGCAGCACGAGCAACAGCACCAGGAA CTGATCCTCACCGACGTGAAGCACCTGCTGTCGTGCAGCCCGCTGTGGCCGGCCTACCGGCTGCAGAGCGCTGGCGGCGC GCCGGCGGGGCCGCGGGAGCGGCAGGCCGAACCTTCCGGGGCATCCACCCTGCGGTGGCTGCGGTTCCCGGGCGGCGTCG CGGAGATCGGCCACGACGCGCGGGCCGAGGGCGCCGGTTTCGCCTTCGACAACGAATCGCCCCGGCACCGCGTGTACCTG CAGCCCTATGCGCTGGCCTGCAGGCCGGTCAGCACGGGCGAGTACCTGGCCTTCGTCGAGGCCGGCGGCTACCGCGACGC CTCGCTCTGGCTGGCGGAGGGCTGGGACTGGATCCAGGCCATGAAGATCGGGCACCCCCTTTACTGGCGCCGGGGCCCGG TGGAAGAGGGCGCGGGCGGCGGCGATGCCGGCTGGCACGAATTCACGCTGGCCGGTCCCCGGCCGCTCAAGCTGGCGGCT CCTGCCGTGCATCTGTCCTACTACGAAGCGGATGCGTACGCGCGCTGGGCCGGCGCCCGCCTGCCCACCGAGGCGGAATG GGAGGCCGCCGCGGCGGCATCGGGCATGCCGGCCTCGGAAGGGCATTTCGCCGACAGCGGCGTCCTGCATCCCCGCGCTG CACCCGGCACGGCCCGGCCGGGCCCGGACGGGCAGCCGCCGCTGGAGCAGTTGTTCGGCGACGTCTGGGAATGGACGCAG TCCAGCTACGCGGCCTATCCGGGCTTTCGCGTGGCGGACGGCGCCGTGGGCGAATACAACGGCAAGTTCATGGTGAACCA GTACGTGCTCCGGGGAGGGTCCTGCGCGACGCCGCCGGGCCATGTCCGCGCCAGCTACCGGAATTTCTTCCCGGCCACCG CGCGGTGGCAGTTCTCCGGCCTGCGCCTCGCGCGCGACCTGGAGAGCGCCTGA
Upstream 100 bases:
>100_bases GCTGGCGCGGGCGGGTTTCTCGCGCGCGCGGGTCTGGACCGACGAGCGCGGCTGGTTCGCCGTGGCCTACGCGCGGCCCT GATCCCCGGAGACCCCTGCC
Downstream 100 bases:
>100_bases TCCGCGCGGCATCGCGTCACACGGCGTCCAGTGCCTGGGCGAGGTCGGCGGTGAGGTCGTCGATGTGCTCGATGCCCACC GACAGGCGCACCATGCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTPPLSLVRRMAPGGTPTAAAALQERYAEVRRASLALALPLSDEDCCAQSMPDASPVKWHLAHTTWFFETFVLEPRERGF APFHPAFRVLFNSYYNGVGDKHPRPQRGLLTRPAMAQVLEYRQDVDARMERLMAGLQGDPDPDLEALVELGLQHEQQHQE LILTDVKHLLSCSPLWPAYRLQSAGGAPAGPRERQAEPSGASTLRWLRFPGGVAEIGHDARAEGAGFAFDNESPRHRVYL QPYALACRPVSTGEYLAFVEAGGYRDASLWLAEGWDWIQAMKIGHPLYWRRGPVEEGAGGGDAGWHEFTLAGPRPLKLAA PAVHLSYYEADAYARWAGARLPTEAEWEAAAAASGMPASEGHFADSGVLHPRAAPGTARPGPDGQPPLEQLFGDVWEWTQ SSYAAYPGFRVADGAVGEYNGKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFSGLRLARDLESA
Sequences:
>Translated_470_residues MTPPLSLVRRMAPGGTPTAAAALQERYAEVRRASLALALPLSDEDCCAQSMPDASPVKWHLAHTTWFFETFVLEPRERGF APFHPAFRVLFNSYYNGVGDKHPRPQRGLLTRPAMAQVLEYRQDVDARMERLMAGLQGDPDPDLEALVELGLQHEQQHQE LILTDVKHLLSCSPLWPAYRLQSAGGAPAGPRERQAEPSGASTLRWLRFPGGVAEIGHDARAEGAGFAFDNESPRHRVYL QPYALACRPVSTGEYLAFVEAGGYRDASLWLAEGWDWIQAMKIGHPLYWRRGPVEEGAGGGDAGWHEFTLAGPRPLKLAA PAVHLSYYEADAYARWAGARLPTEAEWEAAAAASGMPASEGHFADSGVLHPRAAPGTARPGPDGQPPLEQLFGDVWEWTQ SSYAAYPGFRVADGAVGEYNGKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFSGLRLARDLESA >Mature_469_residues TPPLSLVRRMAPGGTPTAAAALQERYAEVRRASLALALPLSDEDCCAQSMPDASPVKWHLAHTTWFFETFVLEPRERGFA PFHPAFRVLFNSYYNGVGDKHPRPQRGLLTRPAMAQVLEYRQDVDARMERLMAGLQGDPDPDLEALVELGLQHEQQHQEL ILTDVKHLLSCSPLWPAYRLQSAGGAPAGPRERQAEPSGASTLRWLRFPGGVAEIGHDARAEGAGFAFDNESPRHRVYLQ PYALACRPVSTGEYLAFVEAGGYRDASLWLAEGWDWIQAMKIGHPLYWRRGPVEEGAGGGDAGWHEFTLAGPRPLKLAAP AVHLSYYEADAYARWAGARLPTEAEWEAAAAASGMPASEGHFADSGVLHPRAAPGTARPGPDGQPPLEQLFGDVWEWTQS SYAAYPGFRVADGAVGEYNGKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFSGLRLARDLESA
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51527; Mature: 51396
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPLSLVRRMAPGGTPTAAAALQERYAEVRRASLALALPLSDEDCCAQSMPDASPVKWH CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCEEEE LAHTTWFFETFVLEPRERGFAPFHPAFRVLFNSYYNGVGDKHPRPQRGLLTRPAMAQVLE EEHHHEEHHHHEECHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH YRQDVDARMERLMAGLQGDPDPDLEALVELGLQHEQQHQELILTDVKHLLSCSPLWPAYR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LQSAGGAPAGPRERQAEPSGASTLRWLRFPGGVAEIGHDARAEGAGFAFDNESPRHRVYL HHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHHCCCCCCCCCCCEECCCCCCCEEEE QPYALACRPVSTGEYLAFVEAGGYRDASLWLAEGWDWIQAMKIGHPLYWRRGPVEEGAGG CCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCC GDAGWHEFTLAGPRPLKLAAPAVHLSYYEADAYARWAGARLPTEAEWEAAAAASGMPASE CCCCCCEEEECCCCCCEEECCEEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC GHFADSGVLHPRAAPGTARPGPDGQPPLEQLFGDVWEWTQSSYAAYPGFRVADGAVGEYN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC GKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFSGLRLARDLESA CEEEEEEHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHCCC >Mature Secondary Structure TPPLSLVRRMAPGGTPTAAAALQERYAEVRRASLALALPLSDEDCCAQSMPDASPVKWH CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHCCCCCCCEEEE LAHTTWFFETFVLEPRERGFAPFHPAFRVLFNSYYNGVGDKHPRPQRGLLTRPAMAQVLE EEHHHEEHHHHEECHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH YRQDVDARMERLMAGLQGDPDPDLEALVELGLQHEQQHQELILTDVKHLLSCSPLWPAYR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LQSAGGAPAGPRERQAEPSGASTLRWLRFPGGVAEIGHDARAEGAGFAFDNESPRHRVYL HHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCHHHHCCCCCCCCCCCEECCCCCCCEEEE QPYALACRPVSTGEYLAFVEAGGYRDASLWLAEGWDWIQAMKIGHPLYWRRGPVEEGAGG CCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCC GDAGWHEFTLAGPRPLKLAAPAVHLSYYEADAYARWAGARLPTEAEWEAAAAASGMPASE CCCCCCEEEECCCCCCEEECCEEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCC GHFADSGVLHPRAAPGTARPGPDGQPPLEQLFGDVWEWTQSSYAAYPGFRVADGAVGEYN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCC GKFMVNQYVLRGGSCATPPGHVRASYRNFFPATARWQFSGLRLARDLESA CEEEEEEHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA