Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611673

Identifier: 120611673

GI number: 120611673

Start: 3320258

End: 3320815

Strand: Reverse

Name: 120611673

Synonym: Aave_3010

Alternate gene names: NA

Gene position: 3320815-3320258 (Counterclockwise)

Preceding gene: 120611674

Following gene: 120611672

Centisome position: 62.04

GC content: 73.84

Gene sequence:

>558_bases
ATGTCAGAGCCTCTTGCACCTTCCGCGGCGGATGCCGACAGCGACGAGGGCGCCGTCCCTTCCCGGCGCGCGCAGACCAT
CGTGGGCGGCGGCGTGCTGCTCGTCGCGGCAGCGCTCGCCGCGGGCGCCCTGCAGATCCCCGGCGACGCCGGTTACGGCG
GCGTGGGTCCGAACTTCCTGCCCTGGCTGGTCGCGGCGGTGCTCGCCGTCTGCGGCGGTTTCCTGCTGTGGGAGGCGGCT
TCCGGCGGCTTCCGCTCCCTGGGCGCGCCCGGCGGCGCGGCACGGGCCGACAGGCAGGCCTTCGTCTGGGTGTCGGCCGG
GCTGCTGCTCAATGCCGCGCTCATCGGCACGGTGGGCTTCATCGTGAGCTGCACGATCTGCTACGTGCTGGCCGTGCAGG
GCCTGCGCCGCGCGGGCCGCCAGCCGGCCGCCGGCGCCGCGCGCACCTGGGCCGTGGACGTGTTCACCGGCCTGGCCATT
TCCGCGCCGGTGTTCTGGGCTTTCACGCAATTCCTGGCGATCAACCTGCCGGGGCTCACGCAAACGGGGTGGCTGTGA

Upstream 100 bases:

>100_bases
CCGCCGTGCTTCCCGAGTTTCCCTTTTTTTTCCGTACCGCGTGGCACGGCCGGTTGGCGCGTGCCCGCGCGCCATGGCCG
ATATCCCGAGGACACCCATC

Downstream 100 bases:

>100_bases
TGATGGAAATTTTCAACGCCCTGCTGCAGGGCTTCGCGACGGCGGCCACGCCCGCCAACCTGCTGTGGGCGCTGGTGGGC
TGCGCGCTCGGCACGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFLPWLVAAVLAVCGGFLLWEAA
SGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGFIVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAI
SAPVFWAFTQFLAINLPGLTQTGWL

Sequences:

>Translated_185_residues
MSEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFLPWLVAAVLAVCGGFLLWEAA
SGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGFIVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAI
SAPVFWAFTQFLAINLPGLTQTGWL
>Mature_184_residues
SEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFLPWLVAAVLAVCGGFLLWEAAS
GGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGFIVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAIS
APVFWAFTQFLAINLPGLTQTGWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18594; Mature: 18462

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCCCCCHH
PWLVAAVLAVCGGFLLWEAASGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGF
HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
IVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAISAPVFWAFTQFLAINLPGLT
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QTGWL
CCCCC
>Mature Secondary Structure 
SEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFL
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCCCCCHH
PWLVAAVLAVCGGFLLWEAASGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGF
HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
IVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAISAPVFWAFTQFLAINLPGLT
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QTGWL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA