| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611666
Identifier: 120611666
GI number: 120611666
Start: 3311350
End: 3311829
Strand: Direct
Name: 120611666
Synonym: Aave_3003
Alternate gene names: NA
Gene position: 3311350-3311829 (Clockwise)
Preceding gene: 120611665
Following gene: 120611670
Centisome position: 61.86
GC content: 67.92
Gene sequence:
>480_bases ATGACCCTGATCCGCGCAACTTCCATCGCAGCCGCCGTGCTCGCGCTCTCGACCCCCGTGTTCGCCCAGGCGCAGGCCCC GGCGCCCGGCTGCCAGCCCGTCACCGAGCAGCAGGTGGCGGCGCTCTTCGACCGCTGGAACGCATCGCTGCGCACGCTCG ATGCCGACAAGGTGGTCGCCAACTATGCGCCCGACGGGGTGCTGCTGGCGACGGTGTCCAACCAGCCGCGCACGACCACC GCGCAGATCCACGATTATTTCGTGAAATTCCTGAAAGGCCACCCGCAGGGCCGGATCGACAGCCGGACGGTGCGCATCGG CTGCAACGTGGCGCAGGACGTCGGCACCTACACGTTCACCTTCCAGGACGGCAAGGAGGTGCACGCGCGCTACACCTATG TGTACGAGTTCGTCGGCGGCGACTGGAAGATCGCCCACCACCACTCCTCGGCCATGCCCGAGGCCGTCGCCGCCAGGTAA
Upstream 100 bases:
>100_bases CGGTCGCGTTCATGGACGCGCCGAACAATGAAGTCCTGCCCGCCTGACGGGCGGTGCCGCACGCAAGCGGCGACCTGTTC GACTTCCCGAGGACAACTCC
Downstream 100 bases:
>100_bases CGGGCGCGGCCTGTTCCGATTCCCCGCCGCACGGCGGATTTCAGACCAGGGACGTGCGCGCCAGGCGTCGGGCGTTCGCC ACCGCGACACGGTGGACCGG
Product: calcium/calmodulin dependent protein kinase II association-domain-containing protein
Products: NA
Alternate protein names: Kinase; Protein With A Cystatin-Like Fold; Secreted Protein; Exported Protein
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTLIRATSIAAAVLALSTPVFAQAQAPAPGCQPVTEQQVAALFDRWNASLRTLDADKVVANYAPDGVLLATVSNQPRTTT AQIHDYFVKFLKGHPQGRIDSRTVRIGCNVAQDVGTYTFTFQDGKEVHARYTYVYEFVGGDWKIAHHHSSAMPEAVAAR
Sequences:
>Translated_159_residues MTLIRATSIAAAVLALSTPVFAQAQAPAPGCQPVTEQQVAALFDRWNASLRTLDADKVVANYAPDGVLLATVSNQPRTTT AQIHDYFVKFLKGHPQGRIDSRTVRIGCNVAQDVGTYTFTFQDGKEVHARYTYVYEFVGGDWKIAHHHSSAMPEAVAAR >Mature_158_residues TLIRATSIAAAVLALSTPVFAQAQAPAPGCQPVTEQQVAALFDRWNASLRTLDADKVVANYAPDGVLLATVSNQPRTTTA QIHDYFVKFLKGHPQGRIDSRTVRIGCNVAQDVGTYTFTFQDGKEVHARYTYVYEFVGGDWKIAHHHSSAMPEAVAAR
Specific function: Unknown
COG id: COG4875
COG function: function code S; Uncharacterized protein conserved in bacteria with a cystatin-like fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17333; Mature: 17202
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIRATSIAAAVLALSTPVFAQAQAPAPGCQPVTEQQVAALFDRWNASLRTLDADKVVA CCEEEHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHEE NYAPDGVLLATVSNQPRTTTAQIHDYFVKFLKGHPQGRIDSRTVRIGCNVAQDVGTYTFT CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHCCCCEEEE FQDGKEVHARYTYVYEFVGGDWKIAHHHSSAMPEAVAAR ECCCCEEHHEEEEEEEEECCCEEEEECCCCCCCHHHCCC >Mature Secondary Structure TLIRATSIAAAVLALSTPVFAQAQAPAPGCQPVTEQQVAALFDRWNASLRTLDADKVVA CEEEHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHEE NYAPDGVLLATVSNQPRTTTAQIHDYFVKFLKGHPQGRIDSRTVRIGCNVAQDVGTYTFT CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHCCCCEEEE FQDGKEVHARYTYVYEFVGGDWKIAHHHSSAMPEAVAAR ECCCCEEHHEEEEEEEEECCCEEEEECCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA