| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is hemH [H]
Identifier: 120611663
GI number: 120611663
Start: 3307695
End: 3308759
Strand: Direct
Name: hemH [H]
Synonym: Aave_3000
Alternate gene names: 120611663
Gene position: 3307695-3308759 (Clockwise)
Preceding gene: 120611661
Following gene: 120611664
Centisome position: 61.79
GC content: 71.64
Gene sequence:
>1065_bases ATGAACGCATCCGCCGCAGACCGCTCCCCGACCGCCCCGATGCCCCGCACCGCCGTGCTGCTGTGCAACCTGGGCACGCC CGATGCGCCCACCGCGCCCGCGCTGCGCCGCTATCTCGCGCAGTTCCTGTCCGACCCGCGCATCGTGGAGATTCCCCGTG CCGCGTGGCTGCCCATCCTGCACGGCATCATCCTGCGCATCCGGCCGGCGAAGTCCGCGGCCAAGTACGCCAGCATCTGG ATGCCCGAGGGTTCGCCCCTGGCCGTGTGGACGGAGCGCCAGGCCACGCTGCTGCGCGGATGGCTGGGCGAGGCGGGGCT GCGGGTGCAGGTGCGGCATGCGATGCGCTACGGGCAGCCGTCCATCGCCGGCCAGTTGAAGGCCCTGCAGGCCGAAGGCG TGGACCGCGTGCTGGTGCTGCCGCTCTATCCGCAGTACTCGGGCACGACCACCGCGAGCGTGTCGGACGACGTGTGCGCC TATGCGCTGCGCACGCGCCGCCTGCCGGAGCTGCGTTTCGTGAACAGCTACCACGACCACCCCGCCTACATCGACGCGCT GGCACGCAGCGTGCGCGCCCACTGGCAGCGCGAGGGCGGGCCGGCAGAACAGCTGGTGATGAGCTTCCACGGCATTCCGG AGCGCGCCGTGCGCCTGGGCGACCCCTACCAGCAGGAGTGCCTGGCGACCGCCGCGCTGCTGGCGCAGGCGCTGGGCCTG GCGGCGGACCGCTACCGGGTGACCTTCCAGTCCCGCTTCGGCAAGGCCAAGTGGCTGGAGCCCTATACCGAACCGACGCT CATCGAGATGGCCCGTGGCGGCACGCGCAGCGTGGACGTGATGTGCCCGGGGTTCACCAGCGACTGCCTGGAAACGCTGG AGGAAATCAACCAGGAGGCGCGCGAGGCCTTCCTGCACGCGGGCGGCAAGGAATTCCGCTACATCCCCTGCCTGAACGCG GACAACGCCTGGATCACCGCGCTGAGCCGGATCGCGCAGGAGCACCTGTCGGGCTGGGATACGGGGGCACCGGGCGGAGC GGCAGCGCCCGGCCTGGCCCGCTGA
Upstream 100 bases:
>100_bases GTCGAGATCGAGGGTCATCGCGCGGATGCGGGCGGTATCGAGCATGGTGGCCGAGAATAGCGCAACCATTGCATTTCCCT TTCCTTTCCTTCCGCTGTCC
Downstream 100 bases:
>100_bases GCGAGCCGCACCGCGAGGCCCGCGCCATGTTCCGATTGCGCCTGTCCCTGGCTTTCGCCACCCTGGTCGCGCTGGTGTGC GCGCAGGCGGCCTTCGTCTA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNASAADRSPTAPMPRTAVLLCNLGTPDAPTAPALRRYLAQFLSDPRIVEIPRAAWLPILHGIILRIRPAKSAAKYASIW MPEGSPLAVWTERQATLLRGWLGEAGLRVQVRHAMRYGQPSIAGQLKALQAEGVDRVLVLPLYPQYSGTTTASVSDDVCA YALRTRRLPELRFVNSYHDHPAYIDALARSVRAHWQREGGPAEQLVMSFHGIPERAVRLGDPYQQECLATAALLAQALGL AADRYRVTFQSRFGKAKWLEPYTEPTLIEMARGGTRSVDVMCPGFTSDCLETLEEINQEAREAFLHAGGKEFRYIPCLNA DNAWITALSRIAQEHLSGWDTGAPGGAAAPGLAR
Sequences:
>Translated_354_residues MNASAADRSPTAPMPRTAVLLCNLGTPDAPTAPALRRYLAQFLSDPRIVEIPRAAWLPILHGIILRIRPAKSAAKYASIW MPEGSPLAVWTERQATLLRGWLGEAGLRVQVRHAMRYGQPSIAGQLKALQAEGVDRVLVLPLYPQYSGTTTASVSDDVCA YALRTRRLPELRFVNSYHDHPAYIDALARSVRAHWQREGGPAEQLVMSFHGIPERAVRLGDPYQQECLATAALLAQALGL AADRYRVTFQSRFGKAKWLEPYTEPTLIEMARGGTRSVDVMCPGFTSDCLETLEEINQEAREAFLHAGGKEFRYIPCLNA DNAWITALSRIAQEHLSGWDTGAPGGAAAPGLAR >Mature_354_residues MNASAADRSPTAPMPRTAVLLCNLGTPDAPTAPALRRYLAQFLSDPRIVEIPRAAWLPILHGIILRIRPAKSAAKYASIW MPEGSPLAVWTERQATLLRGWLGEAGLRVQVRHAMRYGQPSIAGQLKALQAEGVDRVLVLPLYPQYSGTTTASVSDDVCA YALRTRRLPELRFVNSYHDHPAYIDALARSVRAHWQREGGPAEQLVMSFHGIPERAVRLGDPYQQECLATAALLAQALGL AADRYRVTFQSRFGKAKWLEPYTEPTLIEMARGGTRSVDVMCPGFTSDCLETLEEINQEAREAFLHAGGKEFRYIPCLNA DNAWITALSRIAQEHLSGWDTGAPGGAAAPGLAR
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=336, Percent_Identity=25.5952380952381, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI60499025, Length=331, Percent_Identity=25.6797583081571, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1786681, Length=317, Percent_Identity=47.0031545741325, Blast_Score=285, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6324750, Length=349, Percent_Identity=26.3610315186246, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17864156, Length=347, Percent_Identity=25.3602305475504, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651774, Length=266, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 38834; Mature: 38834
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASAADRSPTAPMPRTAVLLCNLGTPDAPTAPALRRYLAQFLSDPRIVEIPRAAWLPIL CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHH HGIILRIRPAKSAAKYASIWMPEGSPLAVWTERQATLLRGWLGEAGLRVQVRHAMRYGQP HHHHHEECCCHHHHHHHEEECCCCCCEEEEECHHHHHHHHHHCCCCCEEEEHHHHHCCCC SIAGQLKALQAEGVDRVLVLPLYPQYSGTTTASVSDDVCAYALRTRRLPELRFVNSYHDH HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCC PAYIDALARSVRAHWQREGGPAEQLVMSFHGIPERAVRLGDPYQQECLATAALLAQALGL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHC AADRYRVTFQSRFGKAKWLEPYTEPTLIEMARGGTRSVDVMCPGFTSDCLETLEEINQEA CHHHHEEEHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH REAFLHAGGKEFRYIPCLNADNAWITALSRIAQEHLSGWDTGAPGGAAAPGLAR HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNASAADRSPTAPMPRTAVLLCNLGTPDAPTAPALRRYLAQFLSDPRIVEIPRAAWLPIL CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHH HGIILRIRPAKSAAKYASIWMPEGSPLAVWTERQATLLRGWLGEAGLRVQVRHAMRYGQP HHHHHEECCCHHHHHHHEEECCCCCCEEEEECHHHHHHHHHHCCCCCEEEEHHHHHCCCC SIAGQLKALQAEGVDRVLVLPLYPQYSGTTTASVSDDVCAYALRTRRLPELRFVNSYHDH HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCC PAYIDALARSVRAHWQREGGPAEQLVMSFHGIPERAVRLGDPYQQECLATAALLAQALGL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHC AADRYRVTFQSRFGKAKWLEPYTEPTLIEMARGGTRSVDVMCPGFTSDCLETLEEINQEA CHHHHEEEHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH REAFLHAGGKEFRYIPCLNADNAWITALSRIAQEHLSGWDTGAPGGAAAPGLAR HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA