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The map label for this gene is bphP [H]

Identifier: 120611643

GI number: 120611643

Start: 3272576

End: 3273205

Strand: Direct

Name: bphP [H]

Synonym: Aave_2980

Alternate gene names: 120611643

Gene position: 3272576-3273205 (Clockwise)

Preceding gene: 120611641

Following gene: 120611644

Centisome position: 61.14

GC content: 68.73

Gene sequence:

>630_bases
ATGGCCGCGCGCGTGCTGGAAAAGGACGGCGACGCCAGCGGACGGACCGGCCGGCTGGGCCAGCGCATCCAGTCGTCCAG
CAGCCGCATGCAGCGCCTGGTGAGCCAGGTCATGGACATGTCGCGACTGCAGAGCGGCCTGGGCCTGGACCTTCAGCTCG
CCCGCACCGATCTCTCCGCCCTGCTCGCCGATCTCGTCGACGAAGCCAGCACGGCCCACCCCGACATCGAACTGCGCACC
CAGTTGCCGCCCCTGCTCGAAGCCAGCGTGGACGCCGACCGGATCGCCCAGGTGTGCGTGAACCTCATGAGCAACGCGCG
CCACCATGGCCGGCCGGGGCATCCGATCCATGTCTGCGCCCATGCGTTGCCGGGCGGTGGCGCCGCCATCGCCGTCCGGA
ACGTGGCCGCGCCCATCGCCGACGCGATCGCGGGCACCCTGTTCAGCCCGTTCAAGGCATCCTCGACCGGCAACGCCCGC
AACCGCTCCGGCATGGGCCTGGGGCTCTACATCGCCCATGAGATTGTCAGGGGTCACGGCGGAGACATCGCCTACACCTA
CGATGACGGTCATGTGGTTTTCTCGGTACGGATCCCTCCTGCTGCCTCGGGCACAATCGTCGGTTCCTGA

Upstream 100 bases:

>100_bases
GGCCTGGTAACCACAGCTTCCCAGGTCGGGCCTGGATGAACAACCTATTGAGACATCACAGCTAGGCCATGACCTGCGCG
ACCCCCTGCACTCCATCAGC

Downstream 100 bases:

>100_bases
AAACGGCCGCTCCGGCCGAGGAACCGCGACCCCTCATGCACGCAGACATTCTCATCGTTGACGACAATCACGAAGCGGCC
GAGCTGCTGCGTGATCTGCT

Product: histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAARVLEKDGDASGRTGRLGQRIQSSSSRMQRLVSQVMDMSRLQSGLGLDLQLARTDLSALLADLVDEASTAHPDIELRT
QLPPLLEASVDADRIAQVCVNLMSNARHHGRPGHPIHVCAHALPGGGAAIAVRNVAAPIADAIAGTLFSPFKASSTGNAR
NRSGMGLGLYIAHEIVRGHGGDIAYTYDDGHVVFSVRIPPAASGTIVGS

Sequences:

>Translated_209_residues
MAARVLEKDGDASGRTGRLGQRIQSSSSRMQRLVSQVMDMSRLQSGLGLDLQLARTDLSALLADLVDEASTAHPDIELRT
QLPPLLEASVDADRIAQVCVNLMSNARHHGRPGHPIHVCAHALPGGGAAIAVRNVAAPIADAIAGTLFSPFKASSTGNAR
NRSGMGLGLYIAHEIVRGHGGDIAYTYDDGHVVFSVRIPPAASGTIVGS
>Mature_208_residues
AARVLEKDGDASGRTGRLGQRIQSSSSRMQRLVSQVMDMSRLQSGLGLDLQLARTDLSALLADLVDEASTAHPDIELRTQ
LPPLLEASVDADRIAQVCVNLMSNARHHGRPGHPIHVCAHALPGGGAAIAVRNVAAPIADAIAGTLFSPFKASSTGNARN
RSGMGLGLYIAHEIVRGHGGDIAYTYDDGHVVFSVRIPPAASGTIVGS

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87082128, Length=193, Percent_Identity=27.4611398963731, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 21842; Mature: 21711

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARVLEKDGDASGRTGRLGQRIQSSSSRMQRLVSQVMDMSRLQSGLGLDLQLARTDLSA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
LLADLVDEASTAHPDIELRTQLPPLLEASVDADRIAQVCVNLMSNARHHGRPGHPIHVCA
HHHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEE
HALPGGGAAIAVRNVAAPIADAIAGTLFSPFKASSTGNARNRSGMGLGLYIAHEIVRGHG
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
GDIAYTYDDGHVVFSVRIPPAASGTIVGS
CCEEEEECCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AARVLEKDGDASGRTGRLGQRIQSSSSRMQRLVSQVMDMSRLQSGLGLDLQLARTDLSA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
LLADLVDEASTAHPDIELRTQLPPLLEASVDADRIAQVCVNLMSNARHHGRPGHPIHVCA
HHHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEE
HALPGGGAAIAVRNVAAPIADAIAGTLFSPFKASSTGNARNRSGMGLGLYIAHEIVRGHG
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
GDIAYTYDDGHVVFSVRIPPAASGTIVGS
CCEEEEECCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]