Click here to switch to the map view.

The map label for this gene is 120611632

Identifier: 120611632

GI number: 120611632

Start: 3259539

End: 3260504

Strand: Reverse

Name: 120611632

Synonym: Aave_2969

Alternate gene names: NA

Gene position: 3260504-3259539 (Counterclockwise)

Preceding gene: 120611642

Following gene: 120611631

Centisome position: 60.91

GC content: 66.15

Gene sequence:

>966_bases
ATGGGCAGAACGGTATGGAGTGGTGTGTCGCGGCTCGCCGCCGCGGCAGGCATGGTCGGGCTGGCAATGGCCGCCCAGGC
CCAGGAGACGAAGATCGCGCTGGGCATGTCCGGCTGGACCGGCTTCGCGCCGCTGACCCTGGCCGACAAGGCCGGCATCT
TCAGGAAGAATGGCCTGGACGTGGAACTGAAGATGATTCCGCAGAAGGACCGCCACCTCGCCCTGGCATCCAAGGCCATC
CAGTGCGCCGCCACCACGGTGGAGACGCACGTCGCCTGGAACACCAACGGCGTGCCCATCGTTCAGATCTTCCAGATGGA
CAAGTCCTACGGCGCCGACGGTATCGCGGTGCGCAACGACGTGAAGAGCTTCGCCGACCTCAAGGGCAAGACCGTCGCCG
TGAGCGCGCCAGGCACCGCGCCGTACTTCGGCCTGGCCTGGATGCTGTCCAAGAACGGCATGACGCTGAAAGACGTGAAG
ACCGTGTCGCTGGAGCCGCAGCCGGCCGCGCAGGCCTTCGTGTCGGGCCAGAACGACGCCGCGATGACCTACGAGCCGTA
CCTGTCCACCATCCGCGCCAACCCGCAGGCGGGCAGGATCCTCGCCACCACCATCGACTACCCCATGGTGATGGACACCG
TGGGCTGCGCGCCCGAGTGGCTCAAGGCGAACCCCAAGGCCGCGCAGGCGCTCACGCAGTCGTATTTCGATGCGCTGGAG
ATGATCAAGGCCGACCCGGCCAGGTCCAACGAGATCATGGGCGCCGCCGTCAAGCAGACGGGCGAGGCCTTCGCCAAGTC
GTCGGCCTACCTGCGCTGGCAGGACAAGGCCGCCAACCAGAAGTTCTTCGCGGGCGAGCTGCAGCAGTTCATGAAGGATG
CCGGCGCGATCCTGCTGGAGGCGGGCGTCGTGCGCAAGCAGCCGGACAACTTTGCCGCCATGTTCGACGACAGCTTCATC
AAGTGA

Upstream 100 bases:

>100_bases
GGATGCGTGCGCGTTAACCCTGTATAGACAGCATGGGCAGGGGGCAAGAATGGGCGGGCAGTCGATTTCCCAGGTGCATT
CATTCACGAGGAGCAGGACG

Downstream 100 bases:

>100_bases
TGCGTTCGCCGCCACTGCCCACGTTCTTAGCCAGGAGAGCCCAGCGATGAGCCGAGTGACGGGCGCCATGCCCGCTGATC
CCCAACCCGGCGCTCCTGCC

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NMT1/THI5 Like Domain Protein; NMT1/THI5-Like Domain-Containing Protein; NlpA Lipoprotein; Amino Acid ABC Transporter; Nitrate/Sulfonate/Bicarbonate ABC Transporter; NMT1/THI5 Like Family; NLPA Lipoprotein; Signal Peptide Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MGRTVWSGVSRLAAAAGMVGLAMAAQAQETKIALGMSGWTGFAPLTLADKAGIFRKNGLDVELKMIPQKDRHLALASKAI
QCAATTVETHVAWNTNGVPIVQIFQMDKSYGADGIAVRNDVKSFADLKGKTVAVSAPGTAPYFGLAWMLSKNGMTLKDVK
TVSLEPQPAAQAFVSGQNDAAMTYEPYLSTIRANPQAGRILATTIDYPMVMDTVGCAPEWLKANPKAAQALTQSYFDALE
MIKADPARSNEIMGAAVKQTGEAFAKSSAYLRWQDKAANQKFFAGELQQFMKDAGAILLEAGVVRKQPDNFAAMFDDSFI
K

Sequences:

>Translated_321_residues
MGRTVWSGVSRLAAAAGMVGLAMAAQAQETKIALGMSGWTGFAPLTLADKAGIFRKNGLDVELKMIPQKDRHLALASKAI
QCAATTVETHVAWNTNGVPIVQIFQMDKSYGADGIAVRNDVKSFADLKGKTVAVSAPGTAPYFGLAWMLSKNGMTLKDVK
TVSLEPQPAAQAFVSGQNDAAMTYEPYLSTIRANPQAGRILATTIDYPMVMDTVGCAPEWLKANPKAAQALTQSYFDALE
MIKADPARSNEIMGAAVKQTGEAFAKSSAYLRWQDKAANQKFFAGELQQFMKDAGAILLEAGVVRKQPDNFAAMFDDSFI
K
>Mature_320_residues
GRTVWSGVSRLAAAAGMVGLAMAAQAQETKIALGMSGWTGFAPLTLADKAGIFRKNGLDVELKMIPQKDRHLALASKAIQ
CAATTVETHVAWNTNGVPIVQIFQMDKSYGADGIAVRNDVKSFADLKGKTVAVSAPGTAPYFGLAWMLSKNGMTLKDVKT
VSLEPQPAAQAFVSGQNDAAMTYEPYLSTIRANPQAGRILATTIDYPMVMDTVGCAPEWLKANPKAAQALTQSYFDALEM
IKADPARSNEIMGAAVKQTGEAFAKSSAYLRWQDKAANQKFFAGELQQFMKDAGAILLEAGVVRKQPDNFAAMFDDSFIK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34401; Mature: 34270

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTVWSGVSRLAAAAGMVGLAMAAQAQETKIALGMSGWTGFAPLTLADKAGIFRKNGLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCEECCCCC
VELKMIPQKDRHLALASKAIQCAATTVETHVAWNTNGVPIVQIFQMDKSYGADGIAVRND
EEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEEECHHCCCCCEEEHHH
VKSFADLKGKTVAVSAPGTAPYFGLAWMLSKNGMTLKDVKTVSLEPQPAAQAFVSGQNDA
HHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEHHEEEEECCCCHHHHHHHCCCCCC
AMTYEPYLSTIRANPQAGRILATTIDYPMVMDTVGCAPEWLKANPKAAQALTQSYFDALE
EEEEHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH
MIKADPARSNEIMGAAVKQTGEAFAKSSAYLRWQDKAANQKFFAGELQQFMKDAGAILLE
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEE
AGVVRKQPDNFAAMFDDSFIK
CCCHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
GRTVWSGVSRLAAAAGMVGLAMAAQAQETKIALGMSGWTGFAPLTLADKAGIFRKNGLD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCEECCCCC
VELKMIPQKDRHLALASKAIQCAATTVETHVAWNTNGVPIVQIFQMDKSYGADGIAVRND
EEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEEEEECHHCCCCCEEEHHH
VKSFADLKGKTVAVSAPGTAPYFGLAWMLSKNGMTLKDVKTVSLEPQPAAQAFVSGQNDA
HHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEHHEEEEECCCCHHHHHHHCCCCCC
AMTYEPYLSTIRANPQAGRILATTIDYPMVMDTVGCAPEWLKANPKAAQALTQSYFDALE
EEEEHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH
MIKADPARSNEIMGAAVKQTGEAFAKSSAYLRWQDKAANQKFFAGELQQFMKDAGAILLE
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEEE
AGVVRKQPDNFAAMFDDSFIK
CCCHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA